Format

Send to:

Choose Destination

EMX2OS EMX2 opposite strand/antisense RNA [ Homo sapiens (human) ]

Gene ID: 196047, updated on 23-Nov-2021

Summary

Official Symbol
EMX2OSprovided by HGNC
Official Full Name
EMX2 opposite strand/antisense RNAprovided by HGNC
Primary source
HGNC:HGNC:18511
See related
Ensembl:ENSG00000229847 MIM:607637
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
EMX2-AS1; NCRNA00045
Expression
Biased expression in endometrium (RPKM 16.5), kidney (RPKM 12.5) and 5 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See EMX2OS in Genome Data Viewer
Location:
10q26.11
Exon count:
5
Annotation release Status Assembly Chr Location
109.20211119 current GRCh38.p13 (GCF_000001405.39) 10 NC_000010.11 (117484293..117545068, complement)
105.20201022 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (119243804..119304579, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene CRISPRi-validated cis-regulatory element chr10.4282 Neighboring gene uncharacterized LOC105378502 Neighboring gene VISTA enhancers hs935 and hs1032 Neighboring gene empty spiracles homeobox 2 Neighboring gene uncharacterized LOC107984274 Neighboring gene Sharpr-MPRA regulatory region 1206

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

Phenotypes

Associated conditions

Description Tests
Genome wide association study (GWAS) of Chagas cardiomyopathy in Trypanosoma cruzi seropositive subjects.
GeneReviews: Not available

General gene information

Markers

Homology

Other Names

  • EMX2 opposite strand/antisense RNA (non-protein coding)
  • empty spiracles homeobox 2 opposite strand
  • empty spiracles homolog 2 opposite strand

Clone Names

  • FLJ41539

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_002791.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005871, AY117034
    Related
    ENST00000551288.5
  2. NR_144378.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC005871, AY117413
    Related
    ENST00000440007.6

RefSeqs of Annotated Genomes: Homo sapiens Updated Annotation Release 109.20211119

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p13 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p13 Primary Assembly

    Range
    117484293..117545068 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Support Center