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Slc25a36 solute carrier family 25, member 36 [ Mus musculus (house mouse) ]

Gene ID: 192287, updated on 26-Sep-2022

Summary

Official Symbol
Slc25a36provided by MGI
Official Full Name
solute carrier family 25, member 36provided by MGI
Primary source
MGI:MGI:1924909
See related
Ensembl:ENSMUSG00000032449 AllianceGenome:MGI:1924909
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
C330005L02Rik
Summary
Predicted to enable pyrimidine nucleotide transmembrane transporter activity. Predicted to be involved in mitochondrial genome maintenance; pyrimidine nucleotide import into mitochondrion; and regulation of mitochondrial membrane potential. Located in mitochondrion. Is expressed in embryo. Orthologous to human SLC25A36 (solute carrier family 25 member 36). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in limb E14.5 (RPKM 20.5), CNS E18 (RPKM 14.1) and 27 other tissues See more
Orthologs
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Genomic context

See Slc25a36 in Genome Data Viewer
Location:
9; 9 E3.3
Exon count:
9
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (96957014..96993094, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (97075281..97111041, complement)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene casein kinase 1, alpha 1 pseudogene Neighboring gene predicted gene, 19325 Neighboring gene ribosomal protein L7A, pseudogene 10 Neighboring gene pyruvate kinase, muscle pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Gene trapped (1) 
  • Targeted (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables pyrimidine nucleotide transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables pyrimidine nucleotide transmembrane transporter activity ISO
Inferred from Sequence Orthology
more info
 
Process Evidence Code Pubs
involved_in mitochondrial genome maintenance IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in mitochondrial genome maintenance ISO
Inferred from Sequence Orthology
more info
 
involved_in mitochondrion organization ISO
Inferred from Sequence Orthology
more info
 
involved_in pyrimidine nucleotide import into mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in pyrimidine nucleotide transport ISO
Inferred from Sequence Orthology
more info
 
involved_in regulation of mitochondrial membrane potential ISO
Inferred from Sequence Orthology
more info
 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion HDA PubMed 
is_active_in mitochondrion IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in mitochondrion ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
solute carrier family 25 member 36

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_138756.4NP_620095.1  solute carrier family 25 member 36

    See identical proteins and their annotated locations for NP_620095.1

    Status: PROVISIONAL

    Source sequence(s)
    AC121121
    Consensus CDS
    CCDS23420.1
    UniProtKB/Swiss-Prot
    Q922G0
    Related
    ENSMUSP00000082302.5, ENSMUST00000085206.11
    Conserved Domains (2) summary
    PTZ00169
    Location:5290
    PTZ00169; ADP/ATP transporter on adenylate translocase; Provisional
    pfam00153
    Location:2113
    Mito_carr; Mitochondrial carrier protein

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    96957014..96993094 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011242678.4XP_011240980.1  solute carrier family 25 member 36 isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:156245
    Mito_carr; Mitochondrial carrier protein
  2. XM_006510870.5XP_006510933.1  solute carrier family 25 member 36 isoform X1

    Conserved Domains (1) summary
    pfam00153
    Location:156245
    Mito_carr; Mitochondrial carrier protein
  3. XM_006510871.3XP_006510934.1  solute carrier family 25 member 36 isoform X3

    Conserved Domains (1) summary
    pfam00153
    Location:54150
    Mito_carr; Mitochondrial carrier protein