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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001136077.3 → NP_001129549.1 autotaxin isoform 1
See identical proteins and their annotated locations for NP_001129549.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1, also known as alpha) represents the longest transcript and encodes the longest isoform (1). This isoform (1) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AK163881, BY123373, CD741437, EU131009
- Consensus CDS
-
CCDS49607.1
- UniProtKB/Swiss-Prot
-
Q9R1E6
- Related
- ENSMUSP00000128941.2, ENSMUST00000171545.9
- Conserved Domains (4) summary
-
- smart00201
Location:56 → 97
- SO; Somatomedin B -like domains
- smart00477
Location:666 → 896
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:165 → 529
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cd16018
Location:163 → 569
- Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
-
NM_001285994.2 → NP_001272923.1 autotaxin isoform 3
See identical proteins and their annotated locations for NP_001272923.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3, also known as gamma) lacks an in-frame exon and contains an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (3) is shorter, compared to isoform 1. This isoform (3) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AK163881, BY123373, CD741437, EU131010
- Consensus CDS
-
CCDS70628.1
- UniProtKB/Swiss-Prot
-
Q9R1E6
- Related
- ENSMUSP00000132640.3, ENSMUST00000167541.3
- Conserved Domains (4) summary
-
- smart00201
Location:56 → 97
- SO; Somatomedin B -like domains
- smart00477
Location:639 → 869
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:165 → 477
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cd16018
Location:163 → 517
- Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
-
NM_001285995.2 → NP_001272924.1 autotaxin isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4, also known as epsilon) uses an alternate in-frame splice site in the central coding region, compared to variant 1. The encoded isoform (4) is shorter, compared to isoform 1. This isoform (4) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AK163881, BY123373, CD741437, EU131009
- Consensus CDS
-
CCDS70629.1
- UniProtKB/TrEMBL
-
G3UXY9
- Related
- ENSMUSP00000133877.2, ENSMUST00000173516.8
- Conserved Domains (4) summary
-
- smart00201
Location:56 → 97
- SO; Somatomedin B -like domains
- smart00477
Location:662 → 892
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:165 → 529
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cd16018
Location:163 → 569
- Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
-
NM_001411651.1 → NP_001398580.1 autotaxin isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) uses an alternate in-frame splice site, lacks an in-frame exon, and contains an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (5) is shorter, compared to isoform 1. This isoform (5) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AC123644
-
NM_001411652.1 → NP_001398581.1 autotaxin isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) uses an alternate in-frame splice site and lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (6) is shorter, compared to isoform 1. This isoform (6) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AC123644
-
NM_001411653.1 → NP_001398582.1 autotaxin isoform 7
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) lacks an in-frame exon and lacks a frame-shifting exon in the central coding region, compared to variant 1. The encoded isoform (7) is shorter and has a distinct C-terminus, compared to isoform 1. This isoform (7) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AC123644
-
NM_001411654.1 → NP_001398583.1 autotaxin isoform 8
Status: REVIEWED
- Description
- Transcript Variant: This variant (8) uses an alternate in-frame splice site, lacks an in-frame exon, and lacks a frame-shifting exon in the central coding region, compared to variant 1. The encoded isoform (8) is shorter and has a distinct C-terminus, compared to isoform 1. This isoform (8) may undergo proteolytic processing similar to isoform 2.
- Source sequence(s)
-
AC123644
-
NM_001411655.1 → NP_001398584.1 autotaxin isoform 9
Status: REVIEWED
- Description
- Transcript Variant: This variant (9) uses an alternate exon 1 and lacks an in-frame exon, compared to variant 1. The encoded isoform (9) has a distinct N-terminus and is shorter, compared to isoform 1.
- Source sequence(s)
-
AC123644
-
NM_001411656.1 → NP_001398585.1 autotaxin isoform 10
Status: REVIEWED
- Description
- Transcript Variant: This variant (10) uses an alternate exon 1, uses an alternate in-frame splice site in the central coding region, and lacks an in-frame exon, compared to variant 1. The encoded isoform (10) has a distinct N-terminus and is shorter, compared to isoform 1.
- Source sequence(s)
-
AC123644
-
NM_001411657.1 → NP_001398586.1 autotaxin isoform 11
Status: REVIEWED
- Description
- Transcript Variant: This variant (11) uses an alternate exon 1, lacks an in-frame exon, and contains an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (11) has a distinct N-terminus and is shorter, compared to isoform 1.
- Source sequence(s)
-
AC123644
-
NM_001411658.1 → NP_001398587.1 autotaxin isoform 12
Status: REVIEWED
- Description
- Transcript Variant: This variant (12) uses an alternate exon 1, lacks an in-frame exon, uses an alternate in-frame splice site, and contains an alternate in-frame exon in the central coding region, compared to variant 1. The encoded isoform (12) has a distinct N-terminus and is shorter, compared to isoform 1.
- Source sequence(s)
-
AC123644
-
NM_015744.4 → NP_056559.2 autotaxin isoform 2 preproprotein
See identical proteins and their annotated locations for NP_056559.2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2, also known as beta) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (2) is shorter, compared to isoform 1.
- Source sequence(s)
-
AK161144, BY123373, CD741437
- Consensus CDS
-
CCDS27472.1
- UniProtKB/Swiss-Prot
- A8UH85, A8UH93, B2ZP54, Q6PDE0, Q99LG9, Q9R1E6
- Related
- ENSMUSP00000036180.10, ENSMUST00000041591.16
- Conserved Domains (4) summary
-
- smart00201
Location:56 → 97
- SO; Somatomedin B -like domains
- smart00477
Location:614 → 844
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:165 → 477
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cd16018
Location:163 → 517
- Enpp; Ectonucleotide pyrophosphatase/phosphodiesterase, also called autotaxin
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000081.7 Reference GRCm39 C57BL/6J
- Range
-
54702297..54816284 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_017316505.3 → XP_017171994.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X17
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- pfam01663
Location:227 → 539
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cl00089
Location:676 → 774
- NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
-
XM_036159254.1 → XP_036015147.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X15
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cl00089
Location:724 → 822
- NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
-
XM_036159246.1 → XP_036015139.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X4
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- smart00477
Location:724 → 954
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159244.1 → XP_036015137.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X2
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- smart00477
Location:749 → 979
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159252.1 → XP_036015145.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X13
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cl00089
Location:728 → 826
- NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
-
XM_036159245.1 → XP_036015138.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X3
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- smart00477
Location:728 → 958
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159250.1 → XP_036015143.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X11
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cl00089
Location:753 → 851
- NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.
-
XM_036159243.1 → XP_036015136.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X1
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- smart00477
Location:753 → 983
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159249.1 → XP_036015142.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X8
- Conserved Domains (3) summary
-
- smart00201
Location:56 → 97
- SO; Somatomedin B -like domains
- smart00477
Location:691 → 921
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:165 → 529
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159247.1 → XP_036015140.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X5
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- smart00477
Location:753 → 944
- NUC; DNA/RNA non-specific endonuclease
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
-
XM_036159251.1 → XP_036015144.1 ectonucleotide pyrophosphatase/phosphodiesterase family member 2 isoform X12
- Conserved Domains (3) summary
-
- smart00201
Location:118 → 159
- SO; Somatomedin B -like domains
- pfam01663
Location:227 → 591
- Phosphodiest; Type I phosphodiesterase / nucleotide pyrophosphatase
- cl00089
Location:753 → 851
- NUC; DNA/RNA non-specific endonuclease; prokaryotic and eukaryotic double- and single-stranded DNA and RNA endonucleases also present in phosphodiesterases. They exists as monomers and homodimers.