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AGABI2DRAFT_122974 hypothetical protein [ Agaricus bisporus var. bisporus H97 ]

Gene ID: 18078082, updated on 18-Oct-2023

Summary

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Gene symbol
AGABI2DRAFT_122974
Gene description
hypothetical protein
Locus tag
AGABI2DRAFT_122974
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Agaricus bisporus var. bisporus H97 (strain: H97, variety: bisporus)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Agaricaceae; Agaricus
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Genomic context

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Location:
chromosome: Unknown
Exon count:
8

NW_006267350.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006267350.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the button mushroom Agaricus bisporus reveals mechanisms governing adaptation to a humic-rich ecological niche. Morin E, et al. Proc Natl Acad Sci U S A, 2012 Oct 23. PMID 23045686, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
hypothetical protein
XP_006457104.1
  • similar to hypothetical protein CC1G_02631 [Coprinopsis cinerea okayama7#130]

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_006267350.1 Reference assembly

    Range
    399054..401329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006457041.1 → XP_006457104.1  hypothetical protein AGABI2DRAFT_122974 [Agaricus bisporus var. bisporus H97]

    See identical proteins and their annotated locations for XP_006457104.1

    Status: PROVISIONAL

    Conserved Domains (5) summary
    smart00490
    Location:238 → 329
    HELICc; helicase superfamily c-terminal domain
    smart00382
    Location:1 → 135
    AAA; ATPases associated with a variety of cellular activities
    smart00847
    Location:390 → 440
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:1 → 140
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam07717
    Location:474 → 577
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
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