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Igfbp1 insulin-like growth factor binding protein 1 [ Mus musculus (house mouse) ]

Gene ID: 16006, updated on 2-Nov-2024

Summary

Official Symbol
Igfbp1provided by MGI
Official Full Name
insulin-like growth factor binding protein 1provided by MGI
Primary source
MGI:MGI:96436
See related
Ensembl:ENSMUSG00000020429 AllianceGenome:MGI:96436
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Summary
Enables insulin-like growth factor binding activity. Acts upstream of or within response to insulin. Located in extracellular space. Is expressed in several structures, including early embryo; jaw; liver; mandible primordium; and secondary oocyte. Human ortholog(s) of this gene implicated in diabetic angiopathy. Orthologous to human IGFBP1 (insulin like growth factor binding protein 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward liver E18 (RPKM 581.5) See more
Orthologs
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Genomic context

See Igfbp1 in Genome Data Viewer
Location:
11 A1; 11 4.75 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (7147787..7152546)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (7197787..7202546)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene adenylate cyclase 1 Neighboring gene coiled coil domain 201 Neighboring gene insulin-like growth factor binding protein 3 Neighboring gene predicted gene, 36565

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (4) 
  • Targeted (1)  1 citation

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables insulin-like growth factor I binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables insulin-like growth factor I binding IEA
Inferred from Electronic Annotation
more info
 
enables insulin-like growth factor I binding ISO
Inferred from Sequence Orthology
more info
 
enables insulin-like growth factor II binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables insulin-like growth factor II binding IEA
Inferred from Electronic Annotation
more info
 
enables insulin-like growth factor II binding ISO
Inferred from Sequence Orthology
more info
 
enables insulin-like growth factor binding IPI
Inferred from Physical Interaction
more info
PubMed 
Process Evidence Code Pubs
involved_in insulin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 
involved_in positive regulation of cell growth IEA
Inferred from Electronic Annotation
more info
 
involved_in regulation of insulin-like growth factor receptor signaling pathway IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within response to insulin IDA
Inferred from Direct Assay
more info
PubMed 
involved_in response to organic cyclic compound IEA
Inferred from Electronic Annotation
more info
 
involved_in tissue regeneration IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 
located_in Golgi apparatus ISO
Inferred from Sequence Orthology
more info
 
is_active_in extracellular space IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in extracellular space IDA
Inferred from Direct Assay
more info
PubMed 
located_in extracellular space ISO
Inferred from Sequence Orthology
more info
 

General protein information

Preferred Names
insulin-like growth factor-binding protein 1
Names
IBP-1
IGF-binding protein 1
INSULIN-LIKE GROWTH FACTOR BINDING PROTEIN 1 PRECURSOR (IGFBP-1) (IBP-1) (IGF-BINDING PROTEIN 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_008341.4NP_032367.3  insulin-like growth factor-binding protein 1 precursor

    See identical proteins and their annotated locations for NP_032367.3

    Status: VALIDATED

    Source sequence(s)
    AA060360, AI256511, CF616646, CJ094023, X81579
    Consensus CDS
    CCDS24427.1
    UniProtKB/Swiss-Prot
    P47876, Q5SVY8, Q61732
    Related
    ENSMUSP00000020704.8, ENSMUST00000020704.8
    Conserved Domains (2) summary
    smart00121
    Location:30107
    IB; Insulin growth factor-binding protein homologues
    pfam00086
    Location:189264
    Thyroglobulin_1; Thyroglobulin type-1 repeat

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    7147787..7152546
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)