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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_000755.5 → NP_000746.3 carnitine O-acetyltransferase isoform 1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) encodes isoform 1.
- Source sequence(s)
-
AL158151
- Consensus CDS
-
CCDS6919.1
- UniProtKB/Swiss-Prot
-
Q9BW16
- Related
- ENSP00000315013.2, ENST00000318080.7
- Conserved Domains (1) summary
-
- pfam00755
Location:35 → 611
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_001257363.3 → NP_001244292.2 carnitine O-acetyltransferase isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) contains an alternate exon in the 5' region and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (2) is shorter at the N-terminus, compared to isoform 1. Variants 2 and 6 encode the same protein.
- Source sequence(s)
-
AL158151
- Conserved Domains (1) summary
-
- pfam00755
Location:14 → 594
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_001346546.2 → NP_001333475.2 carnitine O-acetyltransferase isoform 3
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) contains an alternate exon in the 5' region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (3) is longer and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AL158151
- Conserved Domains (1) summary
-
- pfam00755
Location:36 → 616
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_001346547.2 → NP_001333476.2 carnitine O-acetyltransferase isoform 4
Status: REVIEWED
- Description
- Transcript Variant: This variant (4) uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (4) is shorter than isoform 1.
- Source sequence(s)
-
AL158151
- Consensus CDS
-
CCDS94505.1
- UniProtKB/TrEMBL
-
A0A7P0TAR1
- Related
- ENSP00000506267.1, ENST00000681627.1
- Conserved Domains (1) summary
-
- pfam00755
Location:35 → 591
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_001346548.2 → NP_001333477.2 carnitine O-acetyltransferase isoform 5
Status: REVIEWED
- Description
- Transcript Variant: This variant (5) contains an alternate exon in the 5' region, initiates translation at a downstream start codon, and uses an alternate in-frame splice site in the 3' coding region, compared to variant 1. The encoded isoform (5) is shorter than isoform 1.
- Source sequence(s)
-
AL158151
- Conserved Domains (1) summary
-
- pfam00755
Location:14 → 570
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_001346549.2 → NP_001333478.2 carnitine O-acetyltransferase isoform 6
Status: REVIEWED
- Description
- Transcript Variant: This variant (7) uses an alternate in-frame splice site in the 5' coding region, compared to variant 1. The encoded isoform (6) is shorter than isoform 1.
- Source sequence(s)
-
AL158151
- Consensus CDS
-
CCDS94506.1
- UniProtKB/TrEMBL
-
H0Y4Z7
- Related
- ENSP00000395458.2, ENST00000455396.2
- Conserved Domains (1) summary
-
- pfam00755
Location:35 → 575
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
NM_004003.4 → NP_003994.3 carnitine O-acetyltransferase isoform 2
Status: REVIEWED
- Description
- Transcript Variant: This variant (6) contains an alternate exon in the 5' region and initiates translation at a downstream start codon, compared to variant 1. The encoded isoform (2) is shorter at the N-terminus, compared to isoform 1. Variants 2 and 6 encode the same protein.
- Source sequence(s)
-
AL158151
- Conserved Domains (1) summary
-
- pfam00755
Location:14 → 594
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000009.12 Reference GRCh38.p14 Primary Assembly
- Range
-
129094794..129110793 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_005251708.5 → XP_005251765.1 carnitine O-acetyltransferase isoform X3
- UniProtKB/Swiss-Prot
-
P43155
- Conserved Domains (1) summary
-
- pfam00755
Location:14 → 594
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
XM_047422771.1 → XP_047278727.1 carnitine O-acetyltransferase isoform X3
-
XM_047422770.1 → XP_047278726.1 carnitine O-acetyltransferase isoform X2
-
XM_017014275.2 → XP_016869764.1 carnitine O-acetyltransferase isoform X1
- Conserved Domains (1) summary
-
- pfam00755
Location:36 → 616
- Carn_acyltransf; Choline/Carnitine o-acyltransferase
-
XM_047422772.1 → XP_047278728.1 carnitine O-acetyltransferase isoform X3
Alternate T2T-CHM13v2.0
Genomic
-
NC_060933.1 Alternate T2T-CHM13v2.0
- Range
-
141298255..141314238 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
The following Reference Sequences have been suppressed. Explain
These RefSeqs were suppressed for the
cited reason(s). Suppressed RefSeqs do not appear in BLAST databases, related
sequence links, or BLAST links (BLink), but may still be retrieved by clicking on
their accession.version below.
-
NM_144782.1: Suppressed sequence
- Description
- NM_144782.1: This RefSeq was permanently suppressed because currently there is insufficient support for the transcript and the protein.