U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ZNF813 zinc finger protein 813 [ Homo sapiens (human) ]

Gene ID: 126017, updated on 13-May-2022

Summary

Official Symbol
ZNF813provided by HGNC
Official Full Name
zinc finger protein 813provided by HGNC
Primary source
HGNC:HGNC:33257
See related
Ensembl:ENSG00000198346 AllianceGenome:HGNC:33257
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in prostate (RPKM 3.4), placenta (RPKM 2.4) and 25 other tissues See more
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See ZNF813 in Genome Data Viewer
Location:
19q13.42
Exon count:
4
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 19 NC_000019.10 (53467733..53496255)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 19 NC_060943.1 (56547295..56575852)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 19 NC_000019.9 (53970987..53999509)

Chromosome 19 - NC_000019.10Genomic Context describing neighboring genes Neighboring gene ZNF765-ZNF761 readthrough Neighboring gene tropomyosin 3 pseudogene 9 Neighboring gene zinc finger protein 761 Neighboring gene vomeronasal 1 receptor 102 pseudogene Neighboring gene tropomyosin 3 pseudogene 6 Neighboring gene ribosomal protein L39 pseudogene 37 Neighboring gene vomeronasal 1 receptor 103 pseudogene Neighboring gene zinc finger protein 331 Neighboring gene solute carrier family 7 member 3 pseudogene Neighboring gene divergent-paired related homeobox

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ16542, FLJ34141

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001004301.4NP_001004301.2  zinc finger protein 813

    See identical proteins and their annotated locations for NP_001004301.2

    Status: VALIDATED

    Source sequence(s)
    AC022137, AK131422, DB066632, DB235327
    Consensus CDS
    CCDS46172.1
    UniProtKB/Swiss-Prot
    Q6ZN06
    Related
    ENSP00000379684.4, ENST00000396403.9
    Conserved Domains (5) summary
    smart00349
    Location:848
    KRAB; krueppel associated box
    COG5048
    Location:191602
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:525545
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:847
    KRAB; KRAB box
    pfam13465
    Location:313338
    zf-H2C2_2; Zinc-finger double domain

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000019.10 Reference GRCh38.p14 Primary Assembly

    Range
    53467733..53496255
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060943.1 Alternate T2T-CHM13v2.0

    Range
    56547295..56575852
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)