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znf574 zinc finger protein 574 [ Salvelinus alpinus (Arctic char) ]

Gene ID: 112071154, updated on 15-Mar-2024

Summary

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Gene symbol
znf574
Gene description
zinc finger protein 574
Gene type
protein coding
RefSeq status
MODEL
Organism
Salvelinus alpinus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Salvelinus
Orthologs
zebrafish all
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Genomic context

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See znf574 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current ASM291031v2 (GCF_002910315.2) Unplaced Scaffold NW_019942970.1 (109287..137063, complement)

NW_019942970.1Genomic Context describing neighboring genes Neighboring gene glycogen synthase kinase-3 beta-like Neighboring gene zinc finger protein 526

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019942970 Unplaced Scaffold Reference ASM291031v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 26-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Salvelinus alpinus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM291031v2 Primary Assembly

Genomic

  1. NW_019942970.1 Reference ASM291031v2 Primary Assembly

    Range
    109287..137063 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024138618.1 → XP_023994386.1  zinc finger protein 26-like

    Conserved Domains (7) summary
    COG5048
    Location:672 → 863
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:987 → 1007
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:893 → 913
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1041 → 1063
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:975 → 996
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:921 → 1003
    zf-C2H2_8; C2H2-type zinc ribbon
    cl27169
    Location:288 → 370
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...

  2. XM_024138617.1 → XP_023994385.1  zinc finger protein 26-like

    Conserved Domains (7) summary
    COG5048
    Location:672 → 863
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:987 → 1007
    ZF_C2H2; C2H2 Zn finger [structural motif]
    sd00019
    Location:893 → 913
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:1041 → 1063
    zf-C2H2; Zinc finger, C2H2 type
    pfam13465
    Location:975 → 996
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:921 → 1003
    zf-C2H2_8; C2H2-type zinc ribbon
    cl27169
    Location:288 → 370
    ZipA; ZipA C-terminal domain. ZipA, a membrane-anchored protein, is one of at least nine essential gene products necessary for assembly of the septal ring which mediates cell division in E.coli. ZipA and FtsA directly bind FtsZ, a homolog of eukaryotic ...
Nucleotide Protein
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