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birc2 baculoviral IAP repeat containing 2 [ Seriola dumerili (greater amberjack) ]

Gene ID: 111234415, updated on 15-Mar-2024

Summary

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Gene symbol
birc2
Gene description
baculoviral IAP repeat containing 2
See related
Ensembl:ENSSDUG00000004072
Gene type
protein coding
RefSeq status
MODEL
Organism
Seriola dumerili
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Carangaria; Carangiformes; Carangidae; Seriola
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current Sdu_1.0 (GCF_002260705.1) Unplaced Scaffold NW_019174704.1 (4524323..4534381, complement)

NW_019174704.1Genomic Context describing neighboring genes Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 Neighboring gene ribosomal protein L23a Neighboring gene transcriptional coactivator YAP1-like Neighboring gene angiopoietin-like 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_019174704 Unplaced Scaffold Reference Sdu_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Whole Genome Sequencing of Greater Amberjack (Seriola dumerili) for SNP Identification on Aligned Scaffolds and Genome Structural Variation Analysis Using Parallel Resequencing. Araki K, et al. Int J Genomics, 2018. PMID 29785397, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inhibitor of apoptosis protein-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Seriola dumerili Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sdu_1.0 Primary Assembly

Genomic

  1. NW_019174704.1 Reference Sdu_1.0 Primary Assembly

    Range
    4524323..4534381 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022762495.1 → XP_022618216.1  inhibitor of apoptosis protein-like

    UniProtKB/TrEMBL
    A0A3B4TH44
    Conserved Domains (5) summary
    smart00238
    Location:294 → 361
    BIR; Baculoviral inhibition of apoptosis protein repeat
    cd14394
    Location:415 → 464
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    pfam00653
    Location:187 → 251
    BIR; Inhibitor of Apoptosis domain
    cd16713
    Location:589 → 642
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    cl14633
    Location:475 → 568
    DD; Death Domain Superfamily of protein-protein interaction domains

  2. XM_022762497.1 → XP_022618218.1  inhibitor of apoptosis protein-like

    UniProtKB/TrEMBL
    A0A3B4TH44
    Conserved Domains (5) summary
    smart00238
    Location:294 → 361
    BIR; Baculoviral inhibition of apoptosis protein repeat
    cd14394
    Location:415 → 464
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    pfam00653
    Location:187 → 251
    BIR; Inhibitor of Apoptosis domain
    cd16713
    Location:589 → 642
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    cl14633
    Location:475 → 568
    DD; Death Domain Superfamily of protein-protein interaction domains

  3. XM_022762496.1 → XP_022618217.1  inhibitor of apoptosis protein-like

    UniProtKB/TrEMBL
    A0A3B4TH44
    Related
    ENSSDUP00000005514.1, ENSSDUT00000005620.1
    Conserved Domains (5) summary
    smart00238
    Location:294 → 361
    BIR; Baculoviral inhibition of apoptosis protein repeat
    cd14394
    Location:415 → 464
    UBA_BIRC2_3; UBA domain found in baculoviral IAP repeat-containing protein BIRC2, BIRC3 and similar proteins
    pfam00653
    Location:187 → 251
    BIR; Inhibitor of Apoptosis domain
    cd16713
    Location:589 → 642
    RING-HC_BIRC2_3_7; RING finger, HC subclass, found in apoptosis protein c-IAP1, c-IAP2, livin, and similar proteins
    cl14633
    Location:475 → 568
    DD; Death Domain Superfamily of protein-protein interaction domains
Nucleotide Protein
Heading Accession and Version

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