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MEF2C myocyte enhancer factor 2C [ Delphinapterus leucas (beluga whale) ]

Gene ID: 111184512, updated on 15-Mar-2024

Summary

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Gene symbol
MEF2C
Gene description
myocyte enhancer factor 2C
See related
Ensembl:ENSDLEG00000012940
Gene type
protein coding
RefSeq status
MODEL
Organism
Delphinapterus leucas
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Monodontidae; Delphinapterus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ASM228892v3 (GCF_002288925.2) Unplaced Scaffold NW_022098063.1 (27872097..28020653)
100 previous assembly ASM228892v2 (GCF_002288925.1) Unplaced Scaffold NW_019160857.1 (27815234..27963790)

NW_022098063.1Genomic Context describing neighboring genes Neighboring gene protein RER1-like Neighboring gene uncharacterized LOC115801628 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC111184552 Neighboring gene ferritin light chain pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone deacetylase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myocyte-specific enhancer factor 2C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Delphinapterus leucas Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM228892v3 Primary Assembly

Genomic

  1. NW_022098063.1 Reference ASM228892v3 Primary Assembly

    Range
    27872097..28020653
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022593151.1 → XP_022448859.1  myocyte-specific enhancer factor 2C isoform X8

    UniProtKB/TrEMBL
    A0A2Y9PPS1
    Conserved Domains (3) summary
    COG5068
    Location:1 → 263
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:117 → 170
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  2. XM_022593126.2 → XP_022448834.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PPP1
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97 → 150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  3. XM_030759674.1 → XP_030615534.1  myocyte-specific enhancer factor 2C isoform X3

    UniProtKB/TrEMBL
    A0A2Y9PPP1
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97 → 150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  4. XM_030759678.1 → XP_030615538.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A7F8K5W8
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97 → 150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  5. XM_030759679.1 → XP_030615539.1  myocyte-specific enhancer factor 2C isoform X6

    UniProtKB/TrEMBL
    A0A7F8K5W8
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:97 → 150
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  6. XM_022593081.1 → XP_022448789.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q078
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  7. XM_022593120.1 → XP_022448828.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2Y9Q0A8
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:107 → 152
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  8. XM_030759672.1 → XP_030615532.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2Y9Q0A8
    Related
    ENSDLEP00000017740.1, ENSDLET00000019564.1
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:107 → 152
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  9. XM_022593145.2 → XP_022448853.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2Y9Q0D6
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  10. XM_030759676.1 → XP_030615536.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2Y9Q0D6
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  11. XM_022593090.2 → XP_022448798.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q078
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  12. XM_022593135.2 → XP_022448843.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2Y9Q0C1
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  13. XM_030759675.1 → XP_030615535.1  myocyte-specific enhancer factor 2C isoform X4

    UniProtKB/TrEMBL
    A0A2Y9Q0C1
    Related
    ENSDLEP00000017754.1, ENSDLET00000019579.1
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  14. XM_030759677.1 → XP_030615537.1  myocyte-specific enhancer factor 2C isoform X5

    UniProtKB/TrEMBL
    A0A2Y9Q0D6
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  15. XM_030759673.1 → XP_030615533.1  myocyte-specific enhancer factor 2C isoform X2

    UniProtKB/TrEMBL
    A0A2Y9Q0A8
    Conserved Domains (2) summary
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...
    pfam12347
    Location:107 → 152
    HJURP_C; Holliday junction regulator protein family C-terminal repeat

  16. XM_022593098.1 → XP_022448806.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q078
    Related
    ENSDLEP00000017729.1, ENSDLET00000019554.1
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  17. XM_022593110.1 → XP_022448818.1  myocyte-specific enhancer factor 2C isoform X1

    UniProtKB/TrEMBL
    A0A2Y9Q078
    Conserved Domains (2) summary
    COG5068
    Location:1 → 245
    ARG80; Regulator of arginine metabolism and related MADS box-containing transcription factors [Transcription]
    cd00265
    Location:2 → 78
    MADS_MEF2_like; MEF2 (myocyte enhancer factor 2)-like/Type II subfamily of MADS ( MCM1, Agamous, Deficiens, and SRF (serum response factor) box family of eukaryotic transcriptional regulators. Binds DNA and exists as hetero and homo-dimers. Differs from SRF-like/Type I ...

  18. XM_030759680.1 → XP_030615540.1  myocyte-specific enhancer factor 2C isoform X7

    UniProtKB/TrEMBL
    A0A7F8K4W0
Nucleotide Protein
Heading Accession and Version

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