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TGS1 trimethylguanosine synthase 1 [ Phascolarctos cinereus (koala) ]

Gene ID: 110221416, updated on 11-Apr-2024

Summary

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Gene symbol
TGS1
Gene description
trimethylguanosine synthase 1
See related
Ensembl:ENSPCIG00000016232
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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See TGS1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344062.1 (3532985..3595185)

NW_018344062.1Genomic Context describing neighboring genes Neighboring gene XK related 4 Neighboring gene transmembrane protein 68 Neighboring gene Fanconi anemia core complex-associated protein 24 pseudogene Neighboring gene LYN proto-oncogene, Src family tyrosine kinase Neighboring gene uncharacterized LOC110221374

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344062 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA cap trimethylguanosine synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine RNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in 7-methylguanosine cap hypermethylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: trimethylguanosine synthase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344062.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    3532985..3595185
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021005974.1 → XP_020861633.1  LOW QUALITY PROTEIN: trimethylguanosine synthase

    UniProtKB/TrEMBL
    A0A6P5LWL4
    Related
    ENSPCIP00000021395.2, ENSPCIT00000026389.2
    Conserved Domains (1) summary
    pfam09445
    Location:695 → 847
    Methyltransf_15; RNA cap guanine-N2 methyltransferase
Nucleotide Protein
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