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CMTR1 cap methyltransferase 1 [ Phascolarctos cinereus (koala) ]

Gene ID: 110217306, updated on 11-Apr-2024

Summary

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Gene symbol
CMTR1
Gene description
cap methyltransferase 1
See related
Ensembl:ENSPCIG00000024459
Gene type
protein coding
RefSeq status
MODEL
Organism
Phascolarctos cinereus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Metatheria; Diprotodontia; Phascolarctidae; Phascolarctos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
100 current phaCin_unsw_v4.1 (GCF_002099425.1) Unplaced Scaffold NW_018344028.1 (6636135..6687754, complement)

NW_018344028.1Genomic Context describing neighboring genes Neighboring gene MAM domain containing glycosylphosphatidylinositol anchor 1 Neighboring gene coiled-coil domain containing 167 Neighboring gene ring finger protein 8 Neighboring gene TBC1 domain family member 22B

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018344028 Unplaced Scaffold Reference phaCin_unsw_v4.1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA (nucleoside-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine mRNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Phascolarctos cinereus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference phaCin_unsw_v4.1 Primary Assembly

Genomic

  1. NW_018344028.1 Reference phaCin_unsw_v4.1 Primary Assembly

    Range
    6636135..6687754 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_020999634.1 → XP_020855293.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

    UniProtKB/TrEMBL
    A0A6P5LBH8
    Related
    ENSPCIP00000032964.1, ENSPCIT00000040575.2
    Conserved Domains (3) summary
    pfam01585
    Location:87 → 129
    G-patch; G-patch domain
    pfam01728
    Location:232 → 447
    FtsJ; FtsJ-like methyltransferase
    cl12015
    Location:623 → 716
    Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
Nucleotide Protein
Heading Accession and Version

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