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LOC109513956 zinc finger protein 710-like [ Hippocampus comes (tiger tail seahorse) ]

Gene ID: 109513956, updated on 9-Nov-2023

Summary

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Gene symbol
LOC109513956
Gene description
zinc finger protein 710-like
See related
Ensembl:ENSHCOG00000018972
Gene type
protein coding
RefSeq status
MODEL
Organism
Hippocampus comes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Syngnathiaria; Syngnathiformes; Syngnathoidei; Syngnathidae; Hippocampus
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
100 current H_comes_QL1_v1 (GCF_001891065.1) Unplaced Scaffold NW_017805135.1 (5112885..5126990)

NW_017805135.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC109513932 Neighboring gene semaphorin-4B-like Neighboring gene uncharacterized LOC109513933 Neighboring gene uncharacterized LOC109513950 Neighboring gene transmembrane p24 trafficking protein 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_017805135.1 Unplaced Scaffold Reference H_comes_QL1_v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 710-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Hippocampus comes Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference H_comes_QL1_v1 Primary Assembly

Genomic

  1. NW_017805135.1 Reference H_comes_QL1_v1 Primary Assembly

    Range
    5112885..5126990
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_019866716.1 → XP_019722275.1  zinc finger protein 710-like isoform X3

    UniProtKB/TrEMBL
    A0A3Q2YC32
    Related
    ENSHCOP00000015376.1, ENSHCOT00000023269.1
    Conserved Domains (4) summary
    COG5048
    Location:329 → 560
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:320 → 340
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:557 → 581
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:541 → 627
    zf-C2H2_8; C2H2-type zinc ribbon

  2. XM_019866713.1 → XP_019722272.1  zinc finger protein 710-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q2YC32
    Conserved Domains (4) summary
    COG5048
    Location:358 → 589
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:349 → 369
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:586 → 610
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:570 → 656
    zf-C2H2_8; C2H2-type zinc ribbon

  3. XM_019866714.1 → XP_019722273.1  zinc finger protein 710-like isoform X2

    UniProtKB/TrEMBL
    A0A3Q2YC32
    Conserved Domains (4) summary
    COG5048
    Location:358 → 589
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:349 → 369
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:586 → 610
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:570 → 656
    zf-C2H2_8; C2H2-type zinc ribbon

  4. XM_019866712.1 → XP_019722271.1  zinc finger protein 710-like isoform X1

    UniProtKB/TrEMBL
    A0A3Q2YC32
    Conserved Domains (4) summary
    COG5048
    Location:358 → 589
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:349 → 369
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:586 → 610
    zf-H2C2_2; Zinc-finger double domain
    pfam15909
    Location:570 → 656
    zf-C2H2_8; C2H2-type zinc ribbon
Nucleotide Protein
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