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dhx33 DEAH (Asp-Glu-Ala-His) box polypeptide 33 [ Poecilia mexicana ]

Gene ID: 106918938, updated on 13-Mar-2024

Summary

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Gene symbol
dhx33
Gene description
DEAH (Asp-Glu-Ala-His) box polypeptide 33
See related
Ensembl:ENSPMEG00000012075
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia mexicana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
100 current P_mexicana-1.0 (GCF_001443325.1) Unplaced Scaffold NW_015094841.1 (11153..18409)

NW_015094841.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106918939 Neighboring gene complement component 1, q subcomponent binding protein Neighboring gene carbohydrate-responsive element-binding protein-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_015094841.1 Unplaced Scaffold Reference P_mexicana-1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of transcription by RNA polymerase I IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
putative ATP-dependent RNA helicase DHX33
Names
DEAH-box helicase 33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia mexicana Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P_mexicana-1.0

Genomic

  1. NW_015094841.1 Reference P_mexicana-1.0

    Range
    11153..18409
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014989035.1 → XP_014844521.1  putative ATP-dependent RNA helicase DHX33

    UniProtKB/TrEMBL
    A0A3B3YJQ7, A0A3B3YKI5
    Related
    ENSPMEP00000027540.1, ENSPMET00000016853.1
    Conserved Domains (5) summary
    smart00487
    Location:51 → 235
    DEXDc; DEAD-like helicases superfamily
    smart00847
    Location:452 → 537
    HA2; Helicase associated domain (HA2) Add an annotation
    cd00046
    Location:65 → 208
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00271
    Location:265 → 382
    Helicase_C; Helicase conserved C-terminal domain
    pfam07717
    Location:571 → 671
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
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