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Lrp3 LDL receptor related protein 3 [ Dipodomys ordii (Ord's kangaroo rat) ]

Gene ID: 105993140, updated on 13-Mar-2024

Summary

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Gene symbol
Lrp3
Gene description
LDL receptor related protein 3
See related
Ensembl:ENSDORG00000002320
Gene type
protein coding
RefSeq status
MODEL
Organism
Dipodomys ordii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Castorimorpha; Heteromyidae; Dipodomyinae; Dipodomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current Dord_2.0 (GCF_000151885.1) Unplaced Scaffold NW_012267308.1 (2750716..2761848)

NW_012267308.1Genomic Context describing neighboring genes Neighboring gene G-patch domain containing 1 Neighboring gene WD repeat domain 88 Neighboring gene solute carrier family 7 member 10 Neighboring gene CCAAT enhancer binding protein alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_012267308.1 Unplaced Scaffold Reference Dord_2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
low-density lipoprotein receptor-related protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Dipodomys ordii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Dord_2.0

Genomic

  1. NW_012267308.1 Reference Dord_2.0

    Range
    2750716..2761848
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013026297.1 → XP_012881751.1  low-density lipoprotein receptor-related protein 3 isoform X1

    UniProtKB/TrEMBL
    A0A1S3FYW6
    Related
    ENSDORP00000002177.2, ENSDORT00000002319.2
    Conserved Domains (2) summary
    cd00041
    Location:43 → 156
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00112
    Location:454 → 488
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...

  2. XM_013026298.1 → XP_012881752.1  low-density lipoprotein receptor-related protein 3 isoform X2

    UniProtKB/TrEMBL
    A0A1S3G111
    Conserved Domains (2) summary
    cd00041
    Location:43 → 156
    CUB; CUB domain; extracellular domain; present in proteins mostly known to be involved in development; not found in prokaryotes, plants and yeast.
    cd00112
    Location:454 → 488
    LDLa; Low Density Lipoprotein Receptor Class A domain, a cysteine-rich repeat that plays a central role in mammalian cholesterol metabolism; the receptor protein binds LDL and transports it into cells by endocytosis; 7 successive cysteine-rich repeats of about ...
Nucleotide Protein
Heading Accession and Version

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