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Sar1b secretion associated Ras related GTPase 1B [ Fukomys damarensis (Damara mole-rat) ]

Gene ID: 104873162, updated on 12-Mar-2024

Summary

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Gene symbol
Sar1b
Gene description
secretion associated Ras related GTPase 1B
Locus tag
H920_11988
See related
Ensembl:ENSFDAG00000010710
Gene type
protein coding
RefSeq status
MODEL
Organism
Fukomys damarensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Bathyergidae; Fukomys
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
102 current DMR_v1.0_HiC (GCF_012274545.1) Unplaced Scaffold NW_022900921.1 (5320715..5334227, complement)
101 previous assembly DMR_v1.0 (GCF_000743615.1) Unplaced Scaffold NW_011045756.1 (4421084..4434596)

NW_022900921.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117285367 Neighboring gene uncharacterized LOC104873166 Neighboring gene jade family PHD finger 2 Neighboring gene SEC24 homolog A, COPII coat complex component Neighboring gene T-cell-specific guanine nucleotide triphosphate-binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein exit from endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of COPII vesicle coating IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPII vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum exit site IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GTP-binding protein SAR1b

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fukomys damarensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference DMR_v1.0_HiC Primary Assembly

Genomic

  1. NW_022900921.1 Reference DMR_v1.0_HiC Primary Assembly

    Range
    5320715..5334227 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010639707.2 → XP_010638009.1  GTP-binding protein SAR1b

    See identical proteins and their annotated locations for XP_010638009.1

    UniProtKB/TrEMBL
    A0A091D3C2
    Related
    ENSFDAP00000000469.1, ENSFDAT00000028431.1
    Conserved Domains (2) summary
    smart00178
    Location:5 → 197
    SAR; Sar1p-like members of the Ras-family of small GTPases
    cd00879
    Location:3 → 197
    Sar1; Sar1 is an essential component of COPII vesicle coats
Nucleotide Protein
Heading Accession and Version

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