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znf596 zinc finger protein 596 [ Poecilia formosa (Amazon molly) ]

Gene ID: 103149750, updated on 11-Mar-2024

Summary

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Gene symbol
znf596
Gene description
zinc finger protein 596
See related
Ensembl:ENSPFOG00000019832
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
zebrafish all
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Genomic context

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See znf596 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799945.1 (5054007..5057030)

NW_006799945.1Genomic Context describing neighboring genes Neighboring gene paired box 8 Neighboring gene PH and SEC7 domain-containing protein 2-like Neighboring gene hydroxycarboxylic acid receptor 2- Neighboring gene suppressor APC domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799945.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 596

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799945.1 Reference Poecilia_formosa-5.1.2

    Range
    5054007..5057030
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007569069.2 → XP_007569131.1  zinc finger protein 596

    Related
    ENSPFOP00000019959.2, ENSPFOT00000019982.1
    Conserved Domains (3) summary
    COG5048
    Location:252 → 444
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:344 → 364
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:357 → 380
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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