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sod1 superoxide dismutase 1, soluble [ Poecilia formosa (Amazon molly) ]

Gene ID: 103140424, updated on 11-Mar-2024

Summary

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Gene symbol
sod1
Gene description
superoxide dismutase 1, soluble
See related
Ensembl:ENSPFOG00000017181
Gene type
protein coding
RefSeq status
MODEL
Organism
Poecilia formosa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Poeciliidae; Poeciliinae; Poecilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Poecilia_formosa-5.1.2 (GCF_000485575.1) Unplaced Scaffold NW_006799942.1 (3779645..3782201)

NW_006799942.1Genomic Context describing neighboring genes Neighboring gene superoxide dismutase [Cu-Zn]-like Neighboring gene splicing factor, arginine/serine-rich 15-like Neighboring gene uncharacterized LOC103140432 Neighboring gene TIAM Rac1 associated GEF 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_006799942.1 Unplaced Scaffold Reference Poecilia_formosa-5.1.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables superoxide dismutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in removal of superoxide radicals IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in peroxisome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
superoxide dismutase [Cu-Zn]-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Poecilia formosa Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Poecilia_formosa-5.1.2

Genomic

  1. NW_006799942.1 Reference Poecilia_formosa-5.1.2

    Range
    3779645..3782201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_007555579.2 → XP_007555641.1  superoxide dismutase [Cu-Zn]-like

    UniProtKB/TrEMBL
    A0A087YGV3
    Related
    ENSPFOP00000027834.1, ENSPFOT00000027802.1
    Conserved Domains (1) summary
    cd00305
    Location:4 → 147
    Cu-Zn_Superoxide_Dismutase; Copper/zinc superoxide dismutase (SOD). superoxide dismutases catalyse the conversion of superoxide radicals to molecular oxygen. Three evolutionarily distinct families of SODs are known, of which the copper/zinc-binding family is one. Defects in the ...
Nucleotide Protein
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