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ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif 9 [ Erinaceus europaeus (western European hedgehog) ]

Gene ID: 103111340, updated on 11-Mar-2024

Summary

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Gene symbol
ADAMTS9
Gene description
ADAM metallopeptidase with thrombospondin type 1 motif 9
Gene type
protein coding
RefSeq status
MODEL
Organism
Erinaceus europaeus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Erinaceidae; Erinaceinae; Erinaceus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 12
Exon count:
40
Annotation release Status Assembly Chr Location
RS_2023_10 current mEriEur2.1 (GCF_950295315.1) 12 NC_080173.1 (24632405..24829070)
101 previous assembly EriEur2.0 (GCF_000296755.1) Unplaced Scaffold NW_006804051.1 (1549397..1744085, complement)

Chromosome 12 - NC_080173.1Genomic Context describing neighboring genes Neighboring gene membrane associated guanylate kinase, WW and PDZ domain containing 1 Neighboring gene uncharacterized LOC132541868 Neighboring gene small nucleolar RNA U3 Neighboring gene uncharacterized LOC132541869 Neighboring gene uncharacterized LOC132541870 Neighboring gene prickle planar cell polarity protein 2 Neighboring gene ran-specific GTPase-activating protein-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables metalloendopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in extracellular matrix organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
A disintegrin and metalloproteinase with thrombospondin motifs 9

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_950295315.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mEriEur2.1

Genomic

  1. NC_080173.1 Reference mEriEur2.1

    Range
    24632405..24829070
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060202966.1 → XP_060058949.1  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X4

  2. XM_060202965.1 → XP_060058948.1  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X3

  3. XM_007520619.2 → XP_007520681.2  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X1

  4. XM_060202964.1 → XP_060058947.1  A disintegrin and metalloproteinase with thrombospondin motifs 9 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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