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POLRMT RNA polymerase mitochondrial [ Myotis lucifugus (little brown bat) ]

Gene ID: 102427899, updated on 30-Mar-2024

Summary

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Gene symbol
POLRMT
Gene description
RNA polymerase mitochondrial
See related
Ensembl:ENSMLUG00000009223
Gene type
protein coding
RefSeq status
MODEL
Organism
Myotis lucifugus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Chiroptera; Yangochiroptera; Vespertilionidae; Myotis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
102 current Myoluc2.0 (GCF_000147115.1) Unplaced Scaffold NW_005871431.1 (858960..889016)

NW_005871431.1Genomic Context describing neighboring genes Neighboring gene tubulin polyglutamylase complex subunit 1 Neighboring gene 60S acidic ribosomal protein P1 pseudogene Neighboring gene riboflavin kinase-like Neighboring gene U6 spliceosomal RNA Neighboring gene fibroblast growth factor 22 Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 Neighboring gene basigin (Ok blood group)

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005871431 Unplaced Scaffold Reference Myoluc2.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitochondrial promoter sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial DNA-directed RNA polymerase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DNA-directed RNA polymerase, mitochondrial
Names
polymerase (RNA) mitochondrial (DNA directed)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Myotis lucifugus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Myoluc2.0

Genomic

  1. NW_005871431.1 Reference Myoluc2.0

    Range
    858960..889016
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006101807.3 → XP_006101869.1  DNA-directed RNA polymerase, mitochondrial isoform X1

    UniProtKB/TrEMBL
    G1PD86
    Related
    ENSMLUP00000008415.2, ENSMLUT00000009233.2
    Conserved Domains (5) summary
    COG5108
    Location:214 → 1219
    RPO41; Mitochondrial DNA-directed RNA polymerase [Transcription]
    TIGR00756
    Location:250 → 282
    PPR; pentatricopeptide repeat domain (PPR motif)
    sd00004
    Location:248 → 277
    PPR; PPR repeat [structural motif]
    pfam00940
    Location:820 → 1218
    RNA_pol; DNA-dependent RNA polymerase
    pfam14700
    Location:391 → 692
    RPOL_N; DNA-directed RNA polymerase N-terminal

  2. XM_014467174.2 → XP_014322660.1  DNA-directed RNA polymerase, mitochondrial isoform X2

    Conserved Domains (5) summary
    COG5108
    Location:214 → 1159
    RPO41; Mitochondrial DNA-directed RNA polymerase [Transcription]
    TIGR00756
    Location:250 → 282
    PPR; pentatricopeptide repeat domain (PPR motif)
    sd00004
    Location:248 → 277
    PPR; PPR repeat [structural motif]
    pfam00940
    Location:820 → 1158
    RNA_pol; DNA-dependent RNA polymerase
    pfam14700
    Location:391 → 692
    RPOL_N; DNA-directed RNA polymerase N-terminal

RNA

  1. XR_002826041.1 RNA Sequence

Nucleotide Protein
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