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rps16 ribosomal protein S16 [ Pundamilia nyererei ]

Gene ID: 102214814, updated on 10-Mar-2024

Summary

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Gene symbol
rps16
Gene description
ribosomal protein S16
See related
Ensembl:ENSPNYG00000018328
Gene type
protein coding
RefSeq status
MODEL
Organism
Pundamilia nyererei
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Pundamilia
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current PunNye1.0 (GCF_000239375.1) Unplaced Scaffold NW_005187505.1 (1813209..1815992, complement)

NW_005187505.1Genomic Context describing neighboring genes Neighboring gene myogenic factor 5 Neighboring gene myogenic factor 6 Neighboring gene forkhead box protein M1-like Neighboring gene protein phosphatase 1, regulatory subunit 12A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005187505.1 Unplaced Scaffold Reference PunNye1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
40S ribosomal protein S16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pundamilia nyererei Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PunNye1.0

Genomic

  1. NW_005187505.1 Reference PunNye1.0

    Range
    1813209..1815992 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005740858.2 → XP_005740915.1  40S ribosomal protein S16

    See identical proteins and their annotated locations for XP_005740915.1

    UniProtKB/TrEMBL
    A0A3B4GMF2
    Related
    ENSPNYP00000024262.1, ENSPNYT00000024860.1
    Conserved Domains (1) summary
    PLN00210
    Location:6 → 146
    PLN00210; 40S ribosomal protein S16; Provisional
Nucleotide Protein
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