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F13A1 coagulation factor XIII A chain [ Falco cherrug (Saker falcon) ]

Gene ID: 102046693, updated on 3-Aug-2024

Summary

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Gene symbol
F13A1
Gene description
coagulation factor XIII A chain
See related
EnsemblRapid:ENSFCHG00000012393
Gene type
protein coding
RefSeq status
MODEL
Organism
Falco cherrug
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Falconiformes; Falconidae; Falco
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_04 current bFalChe1.pri (GCF_023634085.1) 3 NC_073699.1 (94395441..94458934, complement)
102 previous assembly F_cherrug_v1.0 (GCF_000337975.1) Unplaced Scaffold NW_004994487.1 (5021606..5082549, complement)

Chromosome 3 - NC_073699.1Genomic Context describing neighboring genes Neighboring gene phenylalanyl-tRNA synthetase 2, mitochondrial Neighboring gene neuritin 1 Neighboring gene uncharacterized LOC129735651 Neighboring gene lymphocyte antigen 86

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-glutamine gamma-glutamyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in blood coagulation, fibrin clot formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in peptide cross-linking IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in collagen-containing extracellular matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coagulation factor XIII A chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_023634085.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bFalChe1.pri Primary Assembly

Genomic

  1. NC_073699.1 Reference bFalChe1.pri Primary Assembly

    Range
    94395441..94458934 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055705403.1 → XP_055561378.1  coagulation factor XIII A chain

  2. XM_014276575.3 → XP_014132050.1  coagulation factor XIII A chain

    Conserved Domains (3) summary
    smart00460
    Location:309 → 401
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:47 → 165
    Transglut_N; Transglutaminase family
    pfam00927
    Location:520 → 624
    Transglut_C; Transglutaminase family, C-terminal ig like domain

  3. XM_014276574.3 → XP_014132049.1  coagulation factor XIII A chain

    Related
    ENSFCHP00000020064.1
    Conserved Domains (3) summary
    smart00460
    Location:309 → 401
    TGc; Transglutaminase/protease-like homologues
    pfam00868
    Location:47 → 165
    Transglut_N; Transglutaminase family
    pfam00927
    Location:520 → 624
    Transglut_C; Transglutaminase family, C-terminal ig like domain
Nucleotide Protein
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