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ZMAT3 zinc finger matrin-type 3 [ Geospiza fortis (medium ground-finch) ]

Gene ID: 102036629, updated on 3-Aug-2024

Summary

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Gene symbol
ZMAT3
Gene description
zinc finger matrin-type 3
See related
Ensembl:ENSGFOG00000007697
Gene type
protein coding
RefSeq status
MODEL
Organism
Geospiza fortis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Thraupidae; Geospiza
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
102 current GeoFor_1.0 (GCF_000277835.1) Unplaced Scaffold NW_005054309.1 (5517943..5533635)

NW_005054309.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 639 Neighboring gene phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha Neighboring gene potassium calcium-activated channel subfamily M regulatory beta subunit 2 Neighboring gene TBL1X/Y related 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_005054309 Unplaced Scaffold Reference GeoFor_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger matrin-type protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Geospiza fortis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GeoFor_1.0

Genomic

  1. NW_005054309.1 Reference GeoFor_1.0

    Range
    5517943..5533635
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_031055463.1 → XP_030911323.1  zinc finger matrin-type protein 3

    UniProtKB/TrEMBL
    A0A6I9ZAF3
    Conserved Domains (2) summary
    smart00451
    Location:144 → 177
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_014312337.2 → XP_014167812.1  zinc finger matrin-type protein 3

    UniProtKB/TrEMBL
    A0A6I9ZAF3
    Related
    ENSGFOP00000011100.1, ENSGFOT00000011470.1
    Conserved Domains (2) summary
    smart00451
    Location:144 → 177
    ZnF_U1; U1-like zinc finger
    sd00020
    Location:72 → 94
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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