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Itgb3 integrin subunit beta 3 [ Chinchilla lanigera (long-tailed chinchilla) ]

Gene ID: 102010257, updated on 10-Mar-2024

Summary

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Gene symbol
Itgb3
Gene description
integrin subunit beta 3
See related
Ensembl:ENSCLAG00000003516
Gene type
protein coding
RefSeq status
MODEL
Organism
Chinchilla lanigera
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Chinchillidae; Chinchilla
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
101 current ChiLan1.0 (GCF_000276665.1) Unplaced Scaffold NW_004955478.1 (9788192..9830254, complement)

NW_004955478.1Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 3 Neighboring gene zinc finger protein 45 pseudogene Neighboring gene uncharacterized LOC106146419 Neighboring gene 40S ribosomal protein S24 pseudogene Neighboring gene myosin light chain 4 Neighboring gene cell division cycle 27

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004955478.1 Unplaced Scaffold Reference ChiLan1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fibrinogen binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fibronectin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables integrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell adhesion mediated by integrin IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in integrin-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell surface IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of integrin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
integrin beta-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Chinchilla lanigera Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ChiLan1.0 Primary Assembly

Genomic

  1. NW_004955478.1 Reference ChiLan1.0 Primary Assembly

    Range
    9788192..9830254 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005402248.2 → XP_005402305.1  integrin beta-3

    UniProtKB/TrEMBL
    A0A8C2YKB9
    Related
    ENSCLAP00000004955.1, ENSCLAT00000005047.1
    Conserved Domains (3) summary
    pfam00362
    Location:56 → 479
    Integrin_beta; Integrin, beta chain
    pfam07965
    Location:652 → 735
    Integrin_B_tail; Integrin beta tail domain
    pfam08725
    Location:762 → 804
    Integrin_b_cyt; Integrin beta cytoplasmic domain
Nucleotide Protein
Heading Accession and Version

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