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Znf81 zinc finger protein 81 [ Ictidomys tridecemlineatus (thirteen-lined ground squirrel) ]

Gene ID: 101962668, updated on 8-Mar-2024

Summary

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Gene symbol
Znf81
Gene description
zinc finger protein 81
Locus tag
H1C71_030227
See related
EnsemblRapid:ENSSTOG00015002246
Gene type
protein coding
RefSeq status
MODEL
Organism
Ictidomys tridecemlineatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Sciuromorpha; Sciuridae; Xerinae; Marmotini; Ictidomys
Orthologs
human all
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Genomic context

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Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
103 current HiC_Itri_2 (GCF_016881025.1) X NC_053502.1 (33627866..33695612)
102 previous assembly SpeTri2.0 (GCF_000236235.1) Unplaced Scaffold NW_004936502.1 (13468969..13526510)

Chromosome X - NC_053502.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106144831 Neighboring gene ubiquitously expressed prefoldin like chaperone Neighboring gene 60S ribosomal protein L21-like Neighboring gene aquaporin-11-like Neighboring gene bone morphogenetic protein 15-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 81

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ictidomys tridecemlineatus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference HiC_Itri_2 Primary Assembly

Genomic

  1. NC_053502.1 Reference HiC_Itri_2 Primary Assembly

    Range
    33627866..33695612
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_013358015.3 → XP_013213469.1  zinc finger protein 81

    Related
    ENSSTOP00015002758.1, ENSSTOT00015003056.1
    Conserved Domains (3) summary
    smart00349
    Location:21 → 81
    KRAB; krueppel associated box
    COG5048
    Location:354 → 649
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:442 → 462
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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