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TNFAIP3 TNF alpha induced protein 3 [ Macaca fascicularis (crab-eating macaque) ]

Gene ID: 101867362, updated on 1-Aug-2024

Summary

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Gene symbol
TNFAIP3
Gene description
TNF alpha induced protein 3
See related
Ensembl:ENSMFAG00000000326
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca fascicularis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_05 current T2T-MFA8v1.0 (GCF_037993035.1) 4 NC_088378.1 (41907209..41923634)
102 previous assembly MFA1912RKSv2 (GCF_012559485.2) 4 NC_052258.1 (126621647..126637640, complement)

Chromosome 4 - NC_088378.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135970402 Neighboring gene tyrosine-protein phosphatase non-receptor type 11-like Neighboring gene uncharacterized LOC107129420 Neighboring gene uncharacterized LOC102116126 Neighboring gene small ribosomal subunit protein uS2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Substitution rate and structural divergence of 5'UTR evolution: comparative analysis between human and cynomolgus monkey cDNAs. Osada N, et al. Mol Biol Evol, 2005 Oct. PMID 15944441

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables K63-linked polyubiquitin modification-dependent protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K29-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein K33-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor alpha-induced protein 3
Names
Tumor necrosis factor alpha-induced protein 3
XP_015303866.1
XP_065399527.1
XP_065399528.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_037993035.1-RS_2024_05

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference T2T-MFA8v1.0

Genomic

  1. NC_088378.1 Reference T2T-MFA8v1.0

    Range
    41907209..41923634
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_065543456.1 → XP_065399528.1  tumor necrosis factor alpha-induced protein 3

    UniProtKB/Swiss-Prot
    Q4R8W3
    UniProtKB/TrEMBL
    A0A2K5X7A9, A0A2K5X7F1

  2. XM_015448380.3 → XP_015303866.1  tumor necrosis factor alpha-induced protein 3

    UniProtKB/Swiss-Prot
    Q4R8W3
    UniProtKB/TrEMBL
    A0A2K5X7A9, A0A2K5X7F1
    Conserved Domains (2) summary
    smart00259
    Location:759 → 784
    ZnF_A20; A20-like zinc fingers
    pfam02338
    Location:98 → 257
    OTU; OTU-like cysteine protease

  3. XM_065543455.1 → XP_065399527.1  tumor necrosis factor alpha-induced protein 3

    UniProtKB/Swiss-Prot
    Q4R8W3
    UniProtKB/TrEMBL
    A0A2K5X7A9, A0A2K5X7F1

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001283816.1: Suppressed sequence

    Description
    NM_001283816.1: This RefSeq record was removed as a result of standard genome annotation processing. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q4R8W3.1 GenPept UniProtKB/Swiss-Prot:Q4R8W3

Gene LinkOut

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