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Ddx6 DEAD-box helicase 6 [ Mesocricetus auratus (golden hamster) ]

Gene ID: 101833322, updated on 8-Mar-2024

Summary

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Gene symbol
Ddx6
Gene description
DEAD-box helicase 6
See related
EnsemblRapid:ENSMAUG00000008886
Gene type
protein coding
RefSeq status
MODEL
Organism
Mesocricetus auratus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Mesocricetus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
103 current BCM_Maur_2.0 (GCF_017639785.1) Unplaced Scaffold NW_024429203.1 (23228417..23260781)
102 previous assembly MesAur1.0 (GCF_000349665.1) Unplaced Scaffold NW_004801622.1 (7122123..7154528)

NW_024429203.1Genomic Context describing neighboring genes Neighboring gene BCL9 like Neighboring gene C-X-C motif chemokine receptor 5 Neighboring gene trehalase Neighboring gene pleckstrin homology like domain family B member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De novo assembly, annotation, and characterization of the whole brain transcriptome of male and female Syrian hamsters. McCann KE, et al. Sci Rep, 2017 Jan 10. PMID 28071753, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in P-body assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in stress granule assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in P-body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasmic stress granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable ATP-dependent RNA helicase DDX6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mesocricetus auratus Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Maur_2.0 Primary Assembly

Genomic

  1. NW_024429203.1 Reference BCM_Maur_2.0 Primary Assembly

    Range
    23228417..23260781
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040729726.1 → XP_040585660.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    A0A1U7QCK1
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  2. XM_040729728.1 → XP_040585662.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    A0A1U7QCK1
    Related
    ENSMAUP00000007197.2, ENSMAUT00000011006.2
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6

  3. XM_040729727.1 → XP_040585661.1  probable ATP-dependent RNA helicase DDX6

    UniProtKB/TrEMBL
    A0A1U7QCK1
    Conserved Domains (2) summary
    cd18787
    Location:309 → 438
    SF2_C_DEAD; C-terminal helicase domain of the DEAD box helicases
    cd17940
    Location:98 → 299
    DEADc_DDX6; DEAD-box helicase domain of DEAD box protein 6
Nucleotide Protein
Heading Accession and Version

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