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SET SET nuclear proto-oncogene [ Mustela putorius furo (domestic ferret) ]

Gene ID: 101670640, updated on 8-Mar-2024

Summary

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Gene symbol
SET
Gene description
SET nuclear proto-oncogene
See related
Ensembl:ENSMPUG00000013069
Gene type
protein coding
RefSeq status
MODEL
Organism
Mustela putorius furo (sub-species: furo)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae; Mustelinae; Mustela
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current ASM1176430v1.1 (GCF_011764305.1) Unplaced Scaffold NW_025421428.1 (10051007..10057236)
101 previous assembly MusPutFur1.0 (GCF_000215625.1) Unplaced Scaffold NW_004569198.1 (6064102..6069187, complement)

NW_025421428.1Genomic Context describing neighboring genes Neighboring gene GLE1 RNA export mediator Neighboring gene spectrin alpha, non-erythrocytic 1 Neighboring gene dynein 2 intermediate chain 2 Neighboring gene protein kinase N3 Neighboring gene zinc finger DHHC-type palmitoyltransferase 12 Neighboring gene zyg-11 related cell cycle regulator

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. De-novo transcriptome sequencing of a normalized cDNA pool from influenza infected ferrets. Camp JV, et al. PLoS One, 2012. PMID 22606336, Free PMC Article
  2. Sequencing, annotation, and characterization of the influenza ferret infectome. León AJ, et al. J Virol, 2013 Feb. PMID 23236062, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in nucleosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein SET
Names
SET nuclear oncogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mustela putorius furo Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM1176430v1.1 Primary Assembly

Genomic

  1. NW_025421428.1 Reference ASM1176430v1.1 Primary Assembly

    Range
    10051007..10057236
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_045082549.1 → XP_044938484.1  protein SET isoform X1

    UniProtKB/TrEMBL
    A0A8U0V5B5
    Conserved Domains (1) summary
    pfam00956
    Location:32 → 221
    NAP; Nucleosome assembly protein (NAP)

  2. XM_045082550.1 → XP_044938485.1  protein SET isoform X2

    UniProtKB/TrEMBL
    A0A8U0S8Q6
    Conserved Domains (1) summary
    pfam00956
    Location:32 → 221
    NAP; Nucleosome assembly protein (NAP)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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