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MusPutFur1.0

Description:
Genome assembly of a female ferret
Organism name:
Mustela putorius furo (domestic ferret)
Infraspecific name:
Breed: Sable
Isolate:
ID#1420
Sex:
female
BioSample:
SAMN00149631
BioProject:
PRJNA59869
Submitter:
Ferret Genome Sequencing Consortium
Date:
2011/06/02
Synonyms:
musFur1
Assembly level:
Scaffold
Genome representation:
full
RefSeq category:
representative genome
GenBank assembly accession:
GCA_000215625.1 (latest)
RefSeq assembly accession:
GCF_000215625.1 (latest)
RefSeq assembly and GenBank assembly identical:
no (hide details)
  • Only in RefSeq: chromosome MT (in non-nuclear assembly-unit)
  • Data displayed for RefSeq version
WGS Project:
AEYP01
Assembly method:
ALLPATHS-LG v. R36167
Genome coverage:
162x
Sequencing technology:
Illumina GA II; HiSeq 2000

IDs: 286418 [UID] 286418 [GenBank] 688608 [RefSeq]

See Genome Information for Mustela putorius

There are 2 assemblies for this organism

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History (Show revision history)

Comment

Sequenced and assembled at the Broad Institute. The sequenced animal was purchased from Marshall Farms and prepared by Dr. John Englehardt, University of Iowa. This work was supported by the National Institute of Allergy and Infectious Diseases (NIAID), Genomic ... Sequencing Centers for Infectious Diseases (GSCID) program.  more

Global statistics

Total sequence length2,410,879,678
Total assembly gap length132,851,443
Gaps between scaffolds0
Number of scaffolds7,783
Scaffold N509,335,154
Scaffold L5070
Number of contigs117,483
Contig N5044,823
Contig L5014,472
Total number of chromosomes and plasmids1
Number of component sequences (WGS or clone)117,483

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Global assembly definition

Download the full sequence report
Click on the table row to see sequence details in the table to the right
Assembly Unit Name
Primary Assembly
non-nuclear
The primary assembly unit does not have any assembled chromosomes or linkage groups.
Please download the full sequence report for information on the scaffolds.

Assembly statistics

MoleculeTotal
Length
Scaffold
Count
Ungapped
Length
Scaffold
N50
Spanned
Gaps
Unspanned
Gaps
unplaced2,410,863,1557,7822,278,011,7129,335,154109,7000
MoleculeTotal
Length
Mitochondrion MT16,523
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