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sting1 stimulator of interferon response cGAMP interactor 1 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101472581, updated on 8-Mar-2024

Summary

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Gene symbol
sting1
Gene description
stimulator of interferon response cGAMP interactor 1
See related
Ensembl:ENSMZEG00005006064
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
tmem173
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
7
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG2 NC_036781.1 (16196458..16205206)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531798.1 (1522723..1531472)

Linkage Group LG2 - NC_036781.1Genomic Context describing neighboring genes Neighboring gene ubiquitin-conjugating enzyme E2D 2 (UBC4/5 homolog, yeast) Neighboring gene protein phosphatase 3, catalytic subunit, beta isozyme Neighboring gene DNA damage-inducible transcript 4-like protein-like Neighboring gene bromodomain containing 8b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 2',3'-cyclic GMP-AMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cyclic-di-GMP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in autophagosome assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in defense response to virus IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in innate immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of macroautophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of type I interferon production IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in reticulophagy IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in autophagosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stimulator of interferon genes protein
Names
transmembrane protein 173

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036781.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    16196458..16205206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024805691.1 → XP_024661459.1  stimulator of interferon genes protein

    UniProtKB/TrEMBL
    A0A3P9BDE4
    Related
    ENSMZEP00005007950.1, ENSMZET00005008270.1
    Conserved Domains (1) summary
    pfam15009
    Location:45 → 342
    TMEM173; Transmembrane protein 173
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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