U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

CHMP6 charged multivesicular body protein 6 [ Trichechus manatus latirostris (Florida manatee) ]

Gene ID: 101345360, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
CHMP6
Gene description
charged multivesicular body protein 6
See related
EnsemblRapid:ENSTMLG00000004605
Gene type
protein coding
RefSeq status
MODEL
Organism
Trichechus manatus latirostris (sub-species: latirostris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Sirenia; Trichechidae; Trichechus
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See CHMP6 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_01 current TriManLat1.0 (GCF_000243295.1) Unplaced Scaffold NW_004443964.1 (1966067..1973552, complement)

NW_004443964.1Genomic Context describing neighboring genes Neighboring gene apoptosis associated tyrosine kinase Neighboring gene BAR/IMD domain containing adaptor protein 2 Neighboring gene regulatory associated protein of MTOR complex 1 Neighboring gene U6atac minor spliceosomal RNA Neighboring gene neuronal pentraxin 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004443964 Unplaced Scaffold Reference TriManLat1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in late endosome to vacuole transport via multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle budding from membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in multivesicular body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
charged multivesicular body protein 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000243295.1-RS_2024_01

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TriManLat1.0 Primary Assembly

Genomic

  1. NW_004443964.1 Reference TriManLat1.0 Primary Assembly

    Range
    1966067..1973552 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004374097.2 → XP_004374154.1  charged multivesicular body protein 6

    UniProtKB/TrEMBL
    A0A2Y9DGX6
    Related
    ENSTMLP00000006249.1, ENSTMLT00000006776.1
    Conserved Domains (1) summary
    pfam03357
    Location:18 → 177
    Snf7; Snf7
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.