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faap24 FA core complex associated protein 24 [ Oryzias latipes (Japanese medaka) ]

Gene ID: 101155995, updated on 8-Mar-2024

Summary

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Gene symbol
faap24
Gene description
FA core complex associated protein 24
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryzias latipes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyidae; Oryziinae; Oryzias
Orthologs
human zebrafish all
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Genomic context

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See faap24 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
103 current ASM223467v1 (GCF_002234675.1) 6 NC_019864.2 (5356395..5364323, complement)
102 previous assembly ASM31367v1 (GCF_000313675.1) Unplaced Scaffold NW_004095160.1 (225879..233906)

Chromosome 6 - NC_019864.2Genomic Context describing neighboring genes Neighboring gene fem-1 homolog b Neighboring gene solute carrier family 7 member 10b Neighboring gene tudor domain containing 12 Neighboring gene ankyrin repeat domain 27 (VPS9 domain)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
Fanconi anemia core complex-associated protein 24
Names
Fanconi anemia core complex associated protein 24

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oryzias latipes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM223467v1 Primary Assembly

Genomic

  1. NC_019864.2 Reference ASM223467v1 Primary Assembly

    Range
    5356395..5364323 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004086201.4 → XP_004086249.1  Fanconi anemia core complex-associated protein 24

    UniProtKB/TrEMBL
    A0A3B3HJW6, A0A3P9II70
    Conserved Domains (1) summary
    cl22429
    Location:163 → 209
    HHH_5; Helix-hairpin-helix domain
Nucleotide Protein
Heading Accession and Version

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