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Taxonomy browser (Oryzias latipes)

Oryzias latipes

Taxonomy ID: 8090 (for references in articles please use NCBI:txid8090)
Scientific name: Oryzias latipes (Temminck & Schlegel, 1846)
Genbank common name: Japanese medaka
Inherited blast name: bony fishes
Rank: species
Genetic code: Translation table 1 (Standard)
Mitochondrial genetic code: Translation table 2 (Vertebrate Mitochondrial)
Other names:
synonym: Poecilia latipes Temminck & Schlegel, 1846
common name: Japanese rice fish
common name: medaka
Lineage( full )
cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata; Euacanthomorphacea; Percomorphaceae; Ovalentaria; Atherinomorphae; Beloniformes; Adrianichthyoidei; Adrianichthyidae; Oryziinae; Oryzias
   Entrez records   
Database name Direct links
Nucleotide 101,625
Nucleotide EST 666,891
Nucleotide GSS 566,625
Protein 47,526
Structure 13
Genome 1
Popset 34
Conserved Domains 1
GEO Datasets 370
UniGene 21,803
PubMed Central 2,551
Gene 34,908
SRA Experiments 756
Protein Clusters 13
Identical Protein Groups 42,987
Bio Project 69
Bio Sample 636
Bio Systems 335
Assembly 5
Clone DB 52,027
Probe 81
PubChem BioAssay 15
Taxonomy 1

Genome Information

Go to NCBI genomic BLAST page for Oryzias latipes
Genome view: 24 chromosomes
Names 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24
   Trace records (raw single-pass reads of DNA sequence)   
Sequencing Center Name
Record counts per type
WGS ALL
NIG - National Institute of Genetics (Japan)
1,481,568 1,481,568
Totals per type
1,481,568 1,481,568

External Information Resources (NCBI LinkOut)

LinkOut Subject LinkOut Provider
Oryzias latipes taxonomy taxonomy/phylogenetic Arctos Specimen Database
dryaddb supplemental materials Dryad Digital Repository
Oryzias latipes (Temminck and Schlegel, 1846) taxonomy/phylogenetic Encyclopedia of life
4 records from this provider organism-specific Genomes On Line Database
Show Biotic Interactions taxonomy/phylogenetic Global Biotic Interactions
Related Immune Epitope Information gene/protein/disease-specific Immune Epitope Database and Analysis Resource
Oryzias latipes (Temminck and Schlegel, 1846) taxonomy/phylogenetic Integrated Taxonomic Information System
Medakafish Homepage taxonomy/phylogenetic NCBI taxonomy bookmarks
OMA taxonomy/phylogenetic OMA Browser: Orthologous MAtrix
plazi taxonomy/phylogenetic Plazi
Oryzias latipes taxonomy/phylogenetic TreeBase
2 records from this provider organism-specific WebScipio - eukaryotic gene identification
Oryzias latipes (Temminck & Schlegel, 1846) taxonomy/phylogenetic World Register of Marine Species
3 records from this provider organism-specific diArk - a resource for eukaryotic genome research
Wikipedia taxonomy/phylogenetic iPhylo
Notes:
Groups interested in participating in the LinkOut program should visit the LinkOut home page.
A list of our current non-bibliographic LinkOut providers can be found here.

Information from sequence entries

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Disclaimer: The NCBI taxonomy database is not an authoritative source for nomenclature or classification - please consult the relevant scientific literature for the most reliable information.


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