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faap24 FA core complex associated protein 24 [ Danio rerio (zebrafish) ]

Gene ID: 559470, updated on 9-Sep-2025
Official Symbol
faap24provided by ZNC
Official Full Name
FA core complex associated protein 24provided by ZNC
Primary source
ZFIN:ZDB-GENE-070410-53
See related
Ensembl:ENSDARG00000051731 AllianceGenome:ZFIN:ZDB-GENE-070410-53
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:162267
Summary
Predicted to enable chromatin binding activity. Predicted to act upstream of or within interstrand cross-link repair. Predicted to be part of Fanconi anaemia nuclear complex. Orthologous to human FAAP24 (FA core complex associated protein 24). [provided by Alliance of Genome Resources, Apr 2025]
Orthologs
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See faap24 in Genome Data Viewer
Location:
chromosome: 25
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2025_04 current GRCz12tu (GCF_049306965.1) 25 NC_133200.1 (39048101..39058222, complement)
RS_2024_08 previous assembly GRCz11 (GCF_000002035.6) 25 NC_007136.7 (36287745..36292318, complement)

Chromosome 25 - NC_133200.1Genomic Context describing neighboring genes Neighboring gene dihydrouridine synthase 2 Neighboring gene nuclear factor of activated T cells 3b Neighboring gene transfer RNA threonine (anticodon AGU) Neighboring gene solute carrier family 7 member 10b Neighboring gene si:ch211-113a14.6 Neighboring gene brambleberry

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Clone Names

  • MGC162267

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables chromatin binding IBA
Inferred from Biological aspect of Ancestor
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA damage response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within DNA repair IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within interstrand cross-link repair IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
part_of Fanconi anaemia nuclear complex IBA
Inferred from Biological aspect of Ancestor
more info
 
part_of Fanconi anaemia nuclear complex IEA
Inferred from Electronic Annotation
more info
 
Preferred Names
Fanconi anemia core complex-associated protein 24
Names
Fanconi anemia core complex associated protein 24
Fanconi anemia-associated protein, 24 kDa

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001089523.1NP_001082992.1  Fanconi anemia core complex-associated protein 24

    See identical proteins and their annotated locations for NP_001082992.1

    Status: PROVISIONAL

    Source sequence(s)
    BC133926
    UniProtKB/TrEMBL
    A3KNN2
    Related
    ENSDARP00000067890.4, ENSDART00000073399.5
    Conserved Domains (1) summary
    cl22429
    Location:165212
    HHH_5; Helix-hairpin-helix domain

RefSeqs of Annotated Genomes: GCF_049306965.1-RS_2025_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz12tu Primary Assembly

Genomic

  1. NC_133200.1 Reference GRCz12tu Primary Assembly

    Range
    39048101..39058222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_073942112.1XP_073798213.1  Fanconi anemia core complex-associated protein 24 isoform X1