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CMTR1 cap methyltransferase 1 [ Ovis aries (sheep) ]

Gene ID: 101123242, updated on 11-Apr-2024

Summary

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Gene symbol
CMTR1
Gene description
cap methyltransferase 1
See related
EnsemblRapid:ENSOARG00020024354
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Also known as
FTSJD2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 20
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 20 NC_056073.1 (11367182..11420843)

Chromosome 20 - NC_056073.1Genomic Context describing neighboring genes Neighboring gene ring finger protein 8 Neighboring gene elongation factor 1-alpha 1-like Neighboring gene uncharacterized LOC114109672 Neighboring gene coiled-coil domain containing 167 Neighboring gene MAM domain containing glycosylphosphatidylinositol anchor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056073.1 Chromosome 20 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene expression profiling during increased fetal lung expansion identifies genes likely to regulate development of the distal airways. Sozo F, et al. Physiol Genomics, 2006 Jan 12. PMID 16249314

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA (nucleoside-2'-O-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in 7-methylguanosine mRNA capping IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1
Names
FtsJ methyltransferase domain containing 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056073.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    11367182..11420843
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015102687.4 → XP_014958173.1  cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1

    UniProtKB/TrEMBL
    A0A6P3YRY7, W5PZ85
    Related
    ENSOARP00020031527.1, ENSOART00020038067.2
    Conserved Domains (3) summary
    pfam01585
    Location:87 → 129
    G-patch; G-patch domain
    pfam01728
    Location:232 → 448
    FtsJ; FtsJ-like methyltransferase
    cl12015
    Location:623 → 716
    Adenylation_DNA_ligase_like; Adenylation domain of proteins similar to ATP-dependent polynucleotide ligases
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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