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FOXJ3 forkhead box J3 [ Ovis aries (sheep) ]

Gene ID: 101104696, updated on 10-Oct-2024

Summary

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Gene symbol
FOXJ3
Gene description
forkhead box J3
See related
EnsemblRapid:ENSOARG00020000103
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See FOXJ3 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 1 NC_056054.1 (16704272..16853566, complement)

Chromosome 1 - NC_056054.1Genomic Context describing neighboring genes Neighboring gene guanylate cyclase activator 2B Neighboring gene guanylate cyclase activator 2A Neighboring gene large ribosomal subunit protein uL16-like Neighboring gene small nucleolar RNA SNORA70 Neighboring gene uncharacterized LOC132657709

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056054.1 Chromosome 1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
forkhead box protein J3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056054.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    16704272..16853566 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060398115.1 → XP_060254098.1  forkhead box protein J3 isoform X2

  2. XM_042246600.1 → XP_042102534.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2, W5QGR3
    Conserved Domains (3) summary
    smart00818
    Location:363 → 448
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth
    COG5025
    Location:54 → 335
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    cd20052
    Location:77 → 155
    FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins

  3. XM_042246602.1 → XP_042102536.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2, W5QGR3
    Conserved Domains (3) summary
    smart00818
    Location:363 → 448
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth
    COG5025
    Location:54 → 335
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    cd20052
    Location:77 → 155
    FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins

  4. XM_015091906.4 → XP_014947392.1  forkhead box protein J3 isoform X2

    UniProtKB/TrEMBL
    W5QGR3
    Related
    ENSOARP00020000075.1, ENSOART00020000128.2
    Conserved Domains (2) summary
    pfam00250
    Location:78 → 155
    Forkhead; Forkhead domain
    pfam04592
    Location:324 → 393
    SelP_N; Selenoprotein P, N terminal region

  5. XM_015091903.4 → XP_014947389.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2, W5QGR3
    Related
    ENSOARP00020000071.1, ENSOART00020000122.2
    Conserved Domains (3) summary
    smart00818
    Location:363 → 448
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth
    COG5025
    Location:54 → 335
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    cd20052
    Location:77 → 155
    FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins

  6. XM_060398060.1 → XP_060254043.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2

  7. XM_060398131.1 → XP_060254114.1  forkhead box protein J3 isoform X2

  8. XM_042246601.1 → XP_042102535.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2, W5QGR3
    Conserved Domains (3) summary
    smart00818
    Location:363 → 448
    Amelogenin; Amelogenins, cell adhesion proteins, play a role in the biomineralisation of teeth
    COG5025
    Location:54 → 335
    COG5025; Transcription factor of the Forkhead/HNF3 family [Transcription]
    cd20052
    Location:77 → 155
    FH_FOXJ3; Forkhead (FH) domain found in Forkhead box protein J3 (FOXJ3) and similar proteins

  9. XM_060398107.1 → XP_060254090.1  forkhead box protein J3 isoform X2

  10. XM_060398041.1 → XP_060254024.1  forkhead box protein J3 isoform X1

    UniProtKB/TrEMBL
    A0A6P3YIM9, W5QGR2
Nucleotide Protein Strain
Heading Accession and Version

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