U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

zbtb47b zinc finger and BTB domain containing 47b [ Takifugu rubripes (torafugu) ]

Gene ID: 101078696, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
zbtb47b
Gene description
zinc finger and BTB domain containing 47b
See related
Ensembl:ENSTRUG00000023816
Gene type
protein coding
RefSeq status
MODEL
Organism
Takifugu rubripes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Tetraodontiformes; Tetradontoidea; Tetraodontidae; Takifugu
Also known as
zbtb47
Orthologs
zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 10
Exon count:
6
Annotation release Status Assembly Chr Location
103 current fTakRub1.2 (GCF_901000725.2) 10 NC_042294.1 (6874950..6890039)
101 previous assembly FUGU5 (GCF_000180615.1) 10 NC_018899.1 (4742299..4753052)

Chromosome 10 - NC_042294.1Genomic Context describing neighboring genes Neighboring gene SEC22 homolog C, vesicle trafficking protein Neighboring gene natural killer cell triggering receptor Neighboring gene kelch-like family member 40b Neighboring gene hedgehog acyltransferase like, b

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
zinc finger and BTB domain-containing protein 47
Names
zinc finger and BTB domain containing 47

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Takifugu rubripes Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTakRub1.2 Primary Assembly

Genomic

  1. NC_042294.1 Reference fTakRub1.2 Primary Assembly

    Range
    6874950..6890039
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_029842656.1 → XP_029698516.1  zinc finger and BTB domain-containing protein 47 isoform X1

    UniProtKB/TrEMBL
    A0A3B5KV87

  2. XM_029842657.1 → XP_029698517.1  zinc finger and BTB domain-containing protein 47 isoform X2

    UniProtKB/TrEMBL
    A0A3B5KV87

  3. XM_011607939.2 → XP_011606241.1  zinc finger and BTB domain-containing protein 47 isoform X3

    UniProtKB/TrEMBL
    A0A3B5KV87
    Related
    ENSTRUP00000057132.1, ENSTRUT00000048867.2
    Conserved Domains (5) summary
    PLN03086
    Location:387 → 460
    PLN03086; PRLI-interacting factor K; Provisional
    COG5048
    Location:471 → 640
    COG5048; FOG: Zn-finger [General function prediction only]
    COG5189
    Location:592 → 643
    SFP1; Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]
    sd00017
    Location:542 → 562
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cl38908
    Location:29 → 143
    BTB_POZ; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain superfamily
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.