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IRF7 interferon regulatory factor 7 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101034616, updated on 8-Mar-2024

Summary

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Gene symbol
IRF7
Gene description
interferon regulatory factor 7
See related
EnsemblRapid:ENSSBOG00000035341
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100923.1 (102483896..102487146)

NW_024100923.1Genomic Context describing neighboring genes Neighboring gene secretin Neighboring gene cadherin related family member 5 Neighboring gene PHD and ring finger domains 1 Neighboring gene Ras association domain family member 7 Neighboring gene lamin tail domain containing 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100923 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 7

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100923.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    102483896..102487146
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_039470693.1 → XP_039326627.1  interferon regulatory factor 7 isoform X1

    UniProtKB/TrEMBL
    A0A2K6V336
    Related
    ENSSBOP00000038588.2, ENSSBOT00000055540.2
    Conserved Domains (3) summary
    PRK10263
    Location:140 → 290
    PRK10263; DNA translocase FtsK; Provisional
    pfam00605
    Location:14 → 121
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:288 → 462
    IRF-3; Interferon-regulatory factor 3

  2. XM_039470694.1 → XP_039326628.1  interferon regulatory factor 7 isoform X1

    UniProtKB/TrEMBL
    A0A2K6V336
    Conserved Domains (3) summary
    PRK10263
    Location:140 → 290
    PRK10263; DNA translocase FtsK; Provisional
    pfam00605
    Location:14 → 121
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:288 → 462
    IRF-3; Interferon-regulatory factor 3

  3. XM_039470695.1 → XP_039326629.1  interferon regulatory factor 7 isoform X2

    UniProtKB/TrEMBL
    A0A2K6V355
    Related
    ENSSBOP00000038589.2, ENSSBOT00000055541.2
    Conserved Domains (2) summary
    pfam00605
    Location:14 → 121
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:259 → 433
    IRF-3; Interferon-regulatory factor 3
Nucleotide Protein
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