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FASTKD1 FAST kinase domains 1 [ Pan paniscus (pygmy chimpanzee) ]

Gene ID: 100981130, updated on 8-Mar-2024

Summary

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Gene symbol
FASTKD1
Gene description
FAST kinase domains 1
See related
Ensembl:ENSPPAG00000033920
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan paniscus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanPan1-v2.0_pri (GCF_029289425.2) 13 NC_073262.2 (72188069..72232409, complement)
RS_2023_05 previous assembly NHGRI_mPanPan1-v1.1-0.1.freeze_pri (GCF_029289425.1) 2B NC_073251.1 (72203042..72247375, complement)

Chromosome 13 - NC_073262.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129397231 Neighboring gene uncharacterized LOC134728731 Neighboring gene Bardet-Biedl syndrome 5 Neighboring gene kelch like family member 41 Neighboring gene peptidylprolyl isomerase G Neighboring gene cilia and flagella associated protein 210 Neighboring gene phosphatase, orphan 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial RNA processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of mitochondrial mRNA stability IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
FAST kinase domain-containing protein 1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029289425.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

Genomic

  1. NC_073262.2 Reference NHGRI_mPanPan1-v2.0_pri Primary Assembly

    Range
    72188069..72232409 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_057301430.2 → XP_057157413.1  FAST kinase domain-containing protein 1, mitochondrial isoform X4

  2. XM_057301429.2 → XP_057157412.1  FAST kinase domain-containing protein 1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A2R9B1V7

  3. XM_063595437.1 → XP_063451507.1  FAST kinase domain-containing protein 1, mitochondrial isoform X2

  4. XM_003824297.5 → XP_003824345.1  FAST kinase domain-containing protein 1, mitochondrial isoform X1

    See identical proteins and their annotated locations for XP_003824345.1

    UniProtKB/TrEMBL
    A0A2R9B1V3
    Related
    ENSPPAP00000021399.1
    Conserved Domains (3) summary
    smart00952
    Location:779 → 838
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:575 → 642
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:662 → 742
    FAST_2; FAST kinase-like protein, subdomain 2

  5. XM_024927808.4 → XP_024783576.1  FAST kinase domain-containing protein 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2R9B1V3
    Conserved Domains (3) summary
    smart00952
    Location:779 → 838
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:575 → 642
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:662 → 742
    FAST_2; FAST kinase-like protein, subdomain 2

  6. XM_034954447.3 → XP_034810338.1  FAST kinase domain-containing protein 1, mitochondrial isoform X2

    Conserved Domains (3) summary
    smart00952
    Location:756 → 815
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:552 → 619
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:639 → 719
    FAST_2; FAST kinase-like protein, subdomain 2

  7. XM_034954445.3 → XP_034810336.1  FAST kinase domain-containing protein 1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2R9B1V3
    Conserved Domains (3) summary
    smart00952
    Location:779 → 838
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:575 → 642
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:662 → 742
    FAST_2; FAST kinase-like protein, subdomain 2

  8. XM_055108734.2 → XP_054964709.1  FAST kinase domain-containing protein 1, mitochondrial isoform X5

  9. XM_024927811.3 → XP_024783579.1  FAST kinase domain-containing protein 1, mitochondrial isoform X5

    Conserved Domains (3) summary
    smart00952
    Location:607 → 666
    RAP; This domain is found in various eukaryotic species, particularly in apicomplexans
    pfam06743
    Location:403 → 470
    FAST_1; FAST kinase-like protein, subdomain 1
    pfam08368
    Location:490 → 570
    FAST_2; FAST kinase-like protein, subdomain 2

RNA

  1. XR_010109470.1 RNA Sequence

  2. XR_008624534.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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