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Kpna2 karyopherin subunit alpha 2 [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100768235, updated on 8-Mar-2024

Summary

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Gene symbol
Kpna2
Gene description
karyopherin subunit alpha 2
See related
Ensembl:ENSCGRG00015021161
Gene type
protein coding
RefSeq status
MODEL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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See Kpna2 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
10
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613864.1 (1001308..1011462)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (119939355..119951132, complement)

NW_003613864.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC113836901 Neighboring gene transfer RNA arginine (anticodon CCG) Neighboring gene 40S ribosomal protein S7-like Neighboring gene uncharacterized LOC118239186

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Prediction of transcribed PIWI-interacting RNAs from CHO RNAseq data. Gerstl MP, et al. J Biotechnol, 2013 Jun 20. PMID 23639388
  2. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear localization sequence binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in NLS-bearing protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
importin subunit alpha-1
Names
Importin subunit alpha-2
karyopherin (importin) alpha 2
karyopherin alpha 2 (RAG cohort 1, importin alpha 1)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003613864.1 Reference CriGri_1.0 Primary Assembly

    Range
    1001308..1011462
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003501859.2 → XP_003501907.1  importin subunit alpha-1

    See identical proteins and their annotated locations for XP_003501907.1

    UniProtKB/TrEMBL
    G3HCT1
    Conserved Domains (5) summary
    COG5064
    Location:10 → 528
    SRP1; Karyopherin (importin) alpha [Intracellular trafficking and secretion]
    cd00020
    Location:113 → 238
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    pfam01749
    Location:10 → 98
    IBB; Importin beta binding domain
    pfam16186
    Location:458 → 508
    Arm_3; Atypical Arm repeat
    sd00043
    Location:253 → 278
    ARM; armadillo repeat [structural motif]

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048600.1 Alternate CriGri-PICRH-1.0

    Range
    119939355..119951132 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_027427779.2 → XP_027283580.1  importin subunit alpha-1

    UniProtKB/TrEMBL
    G3HCT1
    Related
    ENSCGRP00015041913.1, ENSCGRT00015079796.1
Nucleotide Protein Strain
Heading Accession and Version

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