Actc1 actin alpha cardiac muscle 1 [Cricetulus griseus (Chinese hamster)] - Gene

Summary

Gene symbol: Actc1
Gene description: actin alpha cardiac muscle 1
See related: Ensembl:ENSCGRG00015005002
Gene type: protein coding
RefSeq status: MODEL
Organism: Cricetulus griseus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 6

Exon count:: 8

Annotation release	Status	Assembly	Chr	Location
104	current	CriGri_1.0 (GCF_000223135.1)	Unplaced Scaffold	NW_003613743.1 (2227810..2233294)
104	current	CriGri-PICRH-1.0 (GCF_003668045.3)	6	NC_048599.1 (64427590..64433073)

NW_003613743.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

PMC85795P4 (e-PCR)
- UniSTS:273493

PMC23952P1 (e-PCR)
- UniSTS:272216

STS_ADH2 (e-PCR)
- UniSTS:470621

GVL|STS_ADH2 (e-PCR)
- UniSTS:470621

UniSTS:478948 (e-PCR)
- UniSTS:478948

Actc1 (e-PCR), detects polymorphism
- UniSTS:478948

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables myosin binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in actin filament organization	IEA Inferred from Electronic Annotation more info	PubMed
involved_in actin-myosin filament sliding	IEA Inferred from Electronic Annotation more info	PubMed
involved_in heart contraction	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in actin filament	IEA Inferred from Electronic Annotation more info	PubMed
located_in sarcomere	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: actin, alpha cardiac muscle 1

Names: Actin, alpha cardiac muscle 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

NW_003613743.1 Reference CriGri_1.0 Primary Assembly

Range

2227810..2233294

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_003499533.5 → XP_003499581.1 actin, alpha cardiac muscle 1

See identical proteins and their annotated locations for XP_003499581.1

UniProtKB/TrEMBL

A0A061IAX8, G3H5Q0

Conserved Domains (1) summary

PTZ00281
Location:4 → 377

PTZ00281; actin; Provisional
XM_035453959.1 → XP_035309850.1 actin, alpha cardiac muscle 1

UniProtKB/TrEMBL

A0A061IAX8, G3H5Q0

Conserved Domains (1) summary

PTZ00281
Location:4 → 377

PTZ00281; actin; Provisional

Alternate CriGri-PICRH-1.0

Genomic

NC_048599.1 Alternate CriGri-PICRH-1.0

Range

64427590..64433073

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_027422263.2 → XP_027278064.1 actin, alpha cardiac muscle 1

UniProtKB/TrEMBL

A0A061IAX8, G3H5Q0

Related

ENSCGRP00015060871.1, ENSCGRT00015081655.1

Conserved Domains (1) summary

PTZ00281
Location:4 → 377

PTZ00281; actin; Provisional
XM_035446841.1 → XP_035302732.1 actin, alpha cardiac muscle 1

UniProtKB/TrEMBL

A0A061IAX8, G3H5Q0

Conserved Domains (1) summary

PTZ00281
Location:4 → 377

PTZ00281; actin; Provisional