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Tubb6 tubulin beta 6 class V [ Cricetulus griseus (Chinese hamster) ]

Gene ID: 100689363, updated on 8-Mar-2024

Summary

Gene symbol
Tubb6
Gene description
tubulin beta 6 class V
Locus tag
I79_012097
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Cricetulus griseus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

Location:
chromosome: 2
Exon count:
2
Annotation release Status Assembly Chr Location
104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614106.1 (498375..509254)
104 current CriGri-PICRH-1.0 (GCF_003668045.3) 2 NC_048595.1 (171989687..172002784, complement)

NW_003614106.1Genomic Context describing neighboring genes Neighboring gene inositol monophosphatase 2 Neighboring gene cell death inducing DFFA like effector a Neighboring gene AFG3 like matrix AAA peptidase subunit 2 Neighboring gene small nucleolar RNA SNORA61

Genomic regions, transcripts, and products

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
tubulin beta-6 chain
Names
beta tubulin
class V beta tubulin

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246791.1NP_001233720.1  tubulin beta-6 chain

    See identical proteins and their annotated locations for NP_001233720.1

    Status: PROVISIONAL

    Source sequence(s)
    DQ103503
    UniProtKB/TrEMBL
    Q4F888, Q60454
    Conserved Domains (1) summary
    PLN00220
    Location:1431
    PLN00220; tubulin beta chain; Provisional

RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CriGri_1.0 Primary Assembly

Genomic

  1. NW_003614106.1 Reference CriGri_1.0 Primary Assembly

    Range
    498375..509254
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate CriGri-PICRH-1.0

Genomic

  1. NC_048595.1 Alternate CriGri-PICRH-1.0

    Range
    171989687..172002784 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)