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ARNT aryl hydrocarbon receptor nuclear translocator [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100673667, updated on 6-Jun-2024

Summary

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Gene symbol
ARNT
Gene description
aryl hydrocarbon receptor nuclear translocator
See related
EnsemblRapid:ENSLAFG00000011282
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 3 NC_087344.1 (180675391..180759903, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573431.1 (41497428..41581970)

Chromosome 3 - NC_087344.1Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL14-like Neighboring gene cathepsin S Neighboring gene cathepsin K Neighboring gene cortexin domain containing 2 Neighboring gene SET domain bifurcated histone lysine methyltransferase 1 Neighboring gene ceramide synthase 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aryl hydrocarbon receptor nuclear translocator

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087344.1 Reference mLoxAfr1.hap2

    Range
    180675391..180759903 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064282544.1 → XP_064138614.1  aryl hydrocarbon receptor nuclear translocator isoform X6

    UniProtKB/TrEMBL
    G3T778

  2. XM_064282542.1 → XP_064138612.1  aryl hydrocarbon receptor nuclear translocator isoform X4

    UniProtKB/TrEMBL
    G3T778
    Related
    ENSLAFP00000036678.1, ENSLAFT00000041934.1

  3. XM_064282541.1 → XP_064138611.1  aryl hydrocarbon receptor nuclear translocator isoform X3

    UniProtKB/TrEMBL
    G3T778
    Related
    ENSLAFP00000050317.1, ENSLAFT00000039206.1

  4. XM_064282540.1 → XP_064138610.1  aryl hydrocarbon receptor nuclear translocator isoform X2

    UniProtKB/TrEMBL
    G3T778

  5. XM_064282539.1 → XP_064138609.1  aryl hydrocarbon receptor nuclear translocator isoform X1

    UniProtKB/TrEMBL
    G3T778
    Related
    ENSLAFP00000009435.5, ENSLAFT00000011285.5

  6. XM_064282543.1 → XP_064138613.1  aryl hydrocarbon receptor nuclear translocator isoform X5

    UniProtKB/TrEMBL
    G3T778
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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