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LOC100670866 tubulin alpha-1C chain [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100670866, updated on 11-Apr-2024

Summary

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Gene symbol
LOC100670866
Gene description
tubulin alpha-1C chain
See related
EnsemblRapid:ENSLAFG00000035715
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 4
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 4 NC_087345.1 (92751016..92759380, complement)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573422.1 (35594556..35602934)

Chromosome 4 - NC_087345.1Genomic Context describing neighboring genes Neighboring gene trophinin associated protein Neighboring gene peripherin Neighboring gene tubulin alpha-1A chain Neighboring gene tubulin alpha-1B chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin alpha-1C chain

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087345.1 Reference mLoxAfr1.hap2

    Range
    92751016..92759380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010596388.3 → XP_010594690.1  tubulin alpha-1C chain

    UniProtKB/TrEMBL
    G3U6K2
    Related
    ENSLAFP00000033969.1, ENSLAFT00000043686.1
    Conserved Domains (1) summary
    PTZ00335
    Location:1 → 448
    PTZ00335; tubulin alpha chain; Provisional
Nucleotide Protein
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Molecular Biology Databases