U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

GATA3 GATA binding protein 3 [ Loxodonta africana (African savanna elephant) ]

Gene ID: 100655161, updated on 11-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
GATA3
Gene description
GATA binding protein 3
See related
EnsemblRapid:ENSLAFG00000002707
Gene type
protein coding
RefSeq status
MODEL
Organism
Loxodonta africana
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Afrotheria; Proboscidea; Elephantidae; Loxodonta
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_04 current mLoxAfr1.hap2 (GCF_030014295.1) 4 NC_087345.1 (147133028..147151519)
102 previous assembly Loxafr3.0 (GCF_000001905.1) Unplaced Scaffold NW_003573435.1 (38197304..38217120, complement)

Chromosome 4 - NC_087345.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC135231269 Neighboring gene TATA-box binding protein associated factor 3 Neighboring gene uncharacterized LOC135231270 Neighboring gene ubiquitin-conjugating enzyme E2 L3 Neighboring gene E3 ubiquitin-protein ligase RNF138-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell fate commitment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in embryonic organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune system development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of epithelial cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
trans-acting T-cell-specific transcription factor GATA-3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030014295.1-RS_2024_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mLoxAfr1.hap2

Genomic

  1. NC_087345.1 Reference mLoxAfr1.hap2

    Range
    147133028..147151519
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_064284842.1 → XP_064140912.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X1

    Related
    ENSLAFP00000002265.4, ENSLAFT00000002706.4

  2. XM_064284843.1 → XP_064140913.1  trans-acting T-cell-specific transcription factor GATA-3 isoform X2

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.