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Gata3 GATA binding protein 3 [ Mus musculus (house mouse) ]

Gene ID: 14462, updated on 27-Feb-2024

Summary

Official Symbol
Gata3provided by MGI
Official Full Name
GATA binding protein 3provided by MGI
Primary source
MGI:MGI:95663
See related
Ensembl:ENSMUSG00000015619 AllianceGenome:MGI:95663
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
jal; Gata-3
Summary
Enables several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; identical protein binding activity; and interleukin-2 receptor binding activity. Involved in several processes, including animal organ development; intracellular signal transduction; and negative regulation of signal transduction. Acts upstream of or within several processes, including animal organ development; regulation of gene expression; and regulation of histone modification. Located in nucleus. Is expressed in several structures, including branchial arch; early conceptus; genitourinary system; nervous system; and sensory organ. Used to study hypoparathyroidism-deafness-renal disease syndrome. Human ortholog(s) of this gene implicated in hypoparathyroidism; hypoparathyroidism-deafness-renal disease syndrome; nephrosis; and sensorineural hearing loss. Orthologous to human GATA3 (GATA binding protein 3). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Biased expression in bladder adult (RPKM 23.1), mammary gland adult (RPKM 22.0) and 12 other tissues See more
Orthologs
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Genomic context

See Gata3 in Genome Data Viewer
Location:
2 A1; 2 6.69 cM
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 2 NC_000068.8 (9861889..9894845, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 2 NC_000068.7 (9857078..9887953, complement)

Chromosome 2 - NC_000068.8Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:9515681-9515868 Neighboring gene CapStarr-seq enhancer MGSCv37_chr2:9517012-9517347 Neighboring gene STARR-seq mESC enhancer starr_03623 Neighboring gene distal regulatory enhancer RNA of Gata3 Neighboring gene STARR-seq mESC enhancer starr_03624 Neighboring gene STARR-seq mESC enhancer starr_03625 Neighboring gene STARR-seq mESC enhancer starr_03626 Neighboring gene predicted gene, 54101 Neighboring gene STARR-seq mESC enhancer starr_03630 Neighboring gene STARR-seq mESC enhancer starr_03633 Neighboring gene STARR-seq mESC enhancer starr_03634 Neighboring gene GATA binding protein 3 opposite strand Neighboring gene Gata3 upstream neighbor Neighboring gene predicted gene 13262 Neighboring gene predicted gene, 31290 Neighboring gene TATA-box binding protein associated factor 3

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)

Pathways from PubChem

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
enables DNA-binding transcription activator activity, RNA polymerase II-specific IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription activator activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
PubMed 
enables DNA-binding transcription factor activity IDA
Inferred from Direct Assay
more info
PubMed 
enables DNA-binding transcription factor activity ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IBA
Inferred from Biological aspect of Ancestor
more info
 
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables DNA-binding transcription repressor activity, RNA polymerase II-specific ISO
Inferred from Sequence Orthology
more info
 
enables E-box binding ISO
Inferred from Sequence Orthology
more info
 
enables HMG box domain binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IBA
Inferred from Biological aspect of Ancestor
more info
 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables RNA polymerase II-specific DNA-binding transcription factor binding ISO
Inferred from Sequence Orthology
more info
 
enables cis-regulatory region sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables cis-regulatory region sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables histone methyltransferase binding ISO
Inferred from Sequence Orthology
more info
 
enables identical protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables interleukin-2 receptor binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables protein binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables sequence-specific DNA binding IDA
Inferred from Direct Assay
more info
PubMed 
enables sequence-specific DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables sequence-specific double-stranded DNA binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription cis-regulatory region binding ISO
Inferred from Sequence Orthology
more info
 
enables transcription coactivator binding IPI
Inferred from Physical Interaction
more info
PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within T cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within T cell differentiation ISO
Inferred from Sequence Orthology
more info
PubMed 
acts_upstream_of_or_within T cell differentiation in thymus IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within T cell differentiation in thymus IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in T cell receptor signaling pathway IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within T-helper 2 cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in T-helper 2 cell differentiation ISO
Inferred from Sequence Orthology
more info
 
involved_in TOR signaling IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within anatomical structure formation involved in morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in aortic valve morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within axon guidance IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cardiac right ventricle morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cartilage development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cell activation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in cell fate commitment IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within cell fate determination IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within cell maturation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cell morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within cellular response to BMP stimulus IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within cellular response to cytokine stimulus IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within cellular response to interleukin-4 IDA
Inferred from Direct Assay
more info
PubMed 
involved_in cellular response to interleukin-4 IEP
Inferred from Expression Pattern
more info
PubMed 
acts_upstream_of_or_within chromatin remodeling IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within chromatin remodeling IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within developmental growth IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ear development ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within embryonic hemopoiesis IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within embryonic hemopoiesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in embryonic organ development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within embryonic organ development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within erythrocyte differentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within homeostasis of number of cells IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within humoral immune response IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in immune system development IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within immune system process IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within in utero embryonic development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in inflammatory response IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within innate immune response IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within inner ear morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of interleukin-13 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of interleukin-4 production IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of interleukin-4 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within interleukin-4 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of interleukin-5 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in kidney development ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within lens development in camera-type eye IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in lymphocyte migration ISO
Inferred from Sequence Orthology
more info
 
involved_in macrophage differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in male gonad development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within mast cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
involved_in mesenchymal to epithelial transition ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within mesonephros development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within negative regulation of DNA demethylation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within negative regulation of DNA demethylation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of cell cycle IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of cell cycle ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of cell motility ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of cell population proliferation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of cell proliferation involved in mesonephros development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of endothelial cell apoptotic process ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of negative regulation of epithelial to mesenchymal transition ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of fibroblast growth factor receptor signaling pathway involved in ureteric bud formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within negative regulation of gene expression IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of glial cell-derived neurotrophic factor receptor signaling pathway involved in ureteric bud formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in negative regulation of inflammatory response ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within negative regulation of interleukin-2 production IDA
Inferred from Direct Assay
more info
PubMed 
involved_in negative regulation of mammary gland epithelial cell proliferation ISO
Inferred from Sequence Orthology
more info
 
involved_in negative regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within negative regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within negative regulation of type II interferon production IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within negative regulation of type II interferon production IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nephric duct formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in nephric duct morphogenesis IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within neuron differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within neuron migration IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within norepinephrine biosynthetic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within otic vesicle development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within parathyroid gland development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within parathyroid hormone secretion IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in pharyngeal system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in phosphatidylinositol 3-kinase/protein kinase B signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of DNA-templated transcription IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of DNA-templated transcription IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of DNA-templated transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of T cell differentiation IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of T-helper 2 cell cytokine production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of cytokine production IDA
Inferred from Direct Assay
more info
PubMed 
involved_in positive regulation of endothelial cell migration ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of gene expression IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of interleukin-13 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of interleukin-13 production ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within positive regulation of interleukin-4 production IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of interleukin-4 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of interleukin-5 production IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of interleukin-5 production ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of miRNA transcription ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of signal transduction ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of thyroid hormone generation ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription by RNA polymerase II IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
PubMed 
involved_in positive regulation of transcription by RNA polymerase II ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of transcription regulatory region DNA binding IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in positive regulation of transcription regulatory region DNA binding ISO
Inferred from Sequence Orthology
more info
 
involved_in positive regulation of ureteric bud formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within post-embryonic development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within pro-T cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 
acts_upstream_of_or_within regulation of T-helper cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in regulation of cellular response to X-ray ISO
Inferred from Sequence Orthology
more info
 
acts_upstream_of_or_within regulation of cytokine production IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of epithelial cell differentiation IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within regulation of establishment of cell polarity IDA
Inferred from Direct Assay
more info
PubMed 
involved_in regulation of nephron tubule epithelial cell differentiation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of neuron apoptotic process IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of neuron projection development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IDA
Inferred from Direct Assay
more info
PubMed 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IGI
Inferred from Genetic Interaction
more info
PubMed 
acts_upstream_of_or_within regulation of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in signal transduction IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within sympathetic nervous system development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within thymic T cell selection IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within thymus development IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of transcription by RNA polymerase II IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within type II interferon production IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within ureter maturation IMP
Inferred from Mutant Phenotype
more info
PubMed 
acts_upstream_of_or_within ureter morphogenesis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in ureteric bud formation IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in uterus development IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in ventricular septum development IMP
Inferred from Mutant Phenotype
more info
PubMed 
Component Evidence Code Pubs
part_of chromatin ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IDA
Inferred from Direct Assay
more info
PubMed 
located_in nucleus ISO
Inferred from Sequence Orthology
more info
PubMed 

General protein information

Preferred Names
trans-acting T-cell-specific transcription factor GATA-3
Names
GATA-binding factor 3

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001355110.2NP_001342039.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL845529
    UniProtKB/TrEMBL
    Q3U223
    Conserved Domains (2) summary
    cd00202
    Location:315365
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl25836
    Location:72275
    Retinal; Retinal protein
  2. NM_001355111.2NP_001342040.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL845529
    UniProtKB/TrEMBL
    Q3TZD6
    Conserved Domains (3) summary
    smart00401
    Location:312350
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
    cd00202
    Location:262312
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl25836
    Location:72276
    Retinal; Retinal protein
  3. NM_001355112.2NP_001342041.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 4

    Status: VALIDATED

    Source sequence(s)
    AL845529
    UniProtKB/TrEMBL
    Q3TZD6
    Conserved Domains (3) summary
    smart00401
    Location:311349
    ZnF_GATA; zinc finger binding to DNA consensus sequence [AT]GATA[AG]
    cd00202
    Location:261311
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C
    cl25836
    Location:72275
    Retinal; Retinal protein
  4. NM_001417046.1NP_001403975.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL845529
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
  5. NM_001417048.1NP_001403977.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL845529
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
  6. NM_001417049.1NP_001403978.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
  7. NM_001417050.1NP_001403979.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
  8. NM_001417051.1NP_001403980.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
  9. NM_001417052.1NP_001403981.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 2

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/TrEMBL
    Q3U223
  10. NM_001417053.1NP_001403982.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/TrEMBL
    Q3TZD6
  11. NM_001417054.1NP_001403983.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 3

    Status: VALIDATED

    Source sequence(s)
    AL845529, AL928704
    UniProtKB/TrEMBL
    Q3TZD6
  12. NM_008091.4NP_032117.1  trans-acting T-cell-specific transcription factor GATA-3 isoform 1

    See identical proteins and their annotated locations for NP_032117.1

    Status: VALIDATED

    Source sequence(s)
    AL845529
    Consensus CDS
    CCDS15674.1
    UniProtKB/Swiss-Prot
    P23772
    UniProtKB/TrEMBL
    Q3U0R5, Q3U223
    Related
    ENSMUSP00000100041.4, ENSMUST00000102976.4
    Conserved Domains (2) summary
    PHA03377
    Location:76260
    PHA03377; EBNA-3C; Provisional
    cd00202
    Location:316366
    ZnF_GATA; Zinc finger DNA binding domain; binds specifically to DNA consensus sequence [AT]GATA[AG] promoter elements; a subset of family members may also bind protein; zinc-finger consensus topology is C-X(2)-C-X(17)-C-X(2)-C

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000068.8 Reference GRCm39 C57BL/6J

    Range
    9861889..9894845 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)