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CELF1 CUGBP Elav-like family member 1 [ Nomascus leucogenys (northern white-cheeked gibbon) ]

Gene ID: 100581450, updated on 8-Mar-2024

Summary

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Gene symbol
CELF1
Gene description
CUGBP Elav-like family member 1
See related
EnsemblRapid:ENSNLEG00000014638
Gene type
protein coding
RefSeq status
MODEL
Organism
Nomascus leucogenys
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hylobatidae; Nomascus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
17
Annotation release Status Assembly Chr Location
103 current Asia_NLE_v1 (GCF_006542625.1) 15 NC_044395.1 (107346800..107436424, complement)
102 previous assembly Nleu_3.0 (GCF_000146795.2) 15 NC_019830.1 (108526176..108583299)

Chromosome 15 - NC_044395.1Genomic Context describing neighboring genes Neighboring gene proteasome 26S subunit, ATPase 3 Neighboring gene receptor associated protein of the synapse Neighboring gene histone H3.3-like Neighboring gene U5 spliceosomal RNA Neighboring gene protein tyrosine phosphatase mitochondrial 1 Neighboring gene kelch repeat and BTB domain containing 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CUGBP Elav-like family member 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Nomascus leucogenys Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Asia_NLE_v1 Primary Assembly

Genomic

  1. NC_044395.1 Reference Asia_NLE_v1 Primary Assembly

    Range
    107346800..107436424 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030829374.1 → XP_030685234.1  CUGBP Elav-like family member 1 isoform X5

    Related
    ENSNLEP00000044583.2, ENSNLET00000047799.2
    Conserved Domains (3) summary
    cd12638
    Location:395 → 486
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  2. XM_030829364.1 → XP_030685224.1  CUGBP Elav-like family member 1 isoform X1

    Conserved Domains (3) summary
    cd12638
    Location:422 → 513
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  3. XM_030829373.1 → XP_030685233.1  CUGBP Elav-like family member 1 isoform X5

    Conserved Domains (3) summary
    cd12638
    Location:395 → 486
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  4. XM_030829372.1 → XP_030685232.1  CUGBP Elav-like family member 1 isoform X4

    Conserved Domains (3) summary
    cd12638
    Location:417 → 508
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  5. XM_030829370.1 → XP_030685230.1  CUGBP Elav-like family member 1 isoform X3

    Conserved Domains (3) summary
    cd12638
    Location:418 → 509
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  6. XM_030829366.1 → XP_030685226.1  CUGBP Elav-like family member 1 isoform X1

    Conserved Domains (3) summary
    cd12638
    Location:422 → 513
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  7. XM_030829369.1 → XP_030685229.1  CUGBP Elav-like family member 1 isoform X2

    Conserved Domains (3) summary
    cd12638
    Location:421 → 512
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  8. XM_030829368.1 → XP_030685228.1  CUGBP Elav-like family member 1 isoform X2

    Conserved Domains (3) summary
    cd12638
    Location:421 → 512
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  9. XM_030829367.1 → XP_030685227.1  CUGBP Elav-like family member 1 isoform X2

    Related
    ENSNLEP00000017835.4, ENSNLET00000018725.4
    Conserved Domains (3) summary
    cd12638
    Location:421 → 512
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  10. XM_030829363.1 → XP_030685223.1  CUGBP Elav-like family member 1 isoform X1

    Conserved Domains (3) summary
    cd12638
    Location:422 → 513
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  11. XM_030829365.1 → XP_030685225.1  CUGBP Elav-like family member 1 isoform X1

    Conserved Domains (3) summary
    cd12638
    Location:422 → 513
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:42 → 125
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:134 → 214
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
Nucleotide Protein
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