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kcnk13 potassium channel, two pore domain subfamily K, member 13 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 100485106, updated on 17-Aug-2024

Summary

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Official Symbol
kcnk13provided by Xenbase
Official Full Name
potassium channel, two pore domain subfamily K, member 13provided by Xenbase
Primary source
Xenbase:XB-GENE-983023
See related
Ensembl:ENSXETG00000015693
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
thik1; thik-1; k2p13.1
Orthologs
human mouse all
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Genomic context

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See kcnk13 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 8 NC_030684.2 (86592536..86643512)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 8 NC_030684.1 (65544123..65591994)

Chromosome 8 - NC_030684.2Genomic Context describing neighboring genes Neighboring gene EF-hand calcium binding domain 11 Neighboring gene tyrosyl-DNA phosphodiesterase 1 Neighboring gene mitochondrial ribosomal protein S10 Neighboring gene proteasome 26S subunit, ATPase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables potassium channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
part_of monoatomic ion channel complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
potassium channel subfamily K member 13
Names
potassium channel, subfamily K, member 13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030684.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    86592536..86643512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002933200.5 → XP_002933246.1  potassium channel subfamily K member 13

    UniProtKB/TrEMBL
    F7CV21
    Related
    ENSXETP00000049184.5, ENSXETT00000049184.5
    Conserved Domains (1) summary
    pfam07885
    Location:89 → 151
    Ion_trans_2; Ion channel
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials