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TBP TATA-box binding protein [ Ailuropoda melanoleuca (giant panda) ]

Gene ID: 100482953, updated on 8-Mar-2024

Summary

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Gene symbol
TBP
Gene description
TATA-box binding protein
Locus tag
PANDA_014728
See related
Ensembl:ENSAMEG00000017055
Gene type
protein coding
RefSeq status
MODEL
Organism
Ailuropoda melanoleuca
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Ursidae; Ailuropoda
Orthologs
human mouse all
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Genomic context

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See TBP in Genome Data Viewer
Location:
chromosome: 10
Exon count:
9
Annotation release Status Assembly Chr Location
103 current ASM200744v2 (GCF_002007445.1) 10 NC_048227.1 (110539977..110563713)
102 previous assembly AilMel_1.0 (GCF_000004335.2) Unplaced Scaffold NW_003218193.1 (796175..819043)

Chromosome 10 - NC_048227.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117804051 Neighboring gene proteasome 20S subunit beta 1 Neighboring gene programmed cell death 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II general transcription initiation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription initiation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TATA-box-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ailuropoda melanoleuca Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM200744v2 Primary Assembly

Genomic

  1. NC_048227.1 Reference ASM200744v2 Primary Assembly

    Range
    110539977..110563713
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034669513.1 → XP_034525404.1  TATA-box-binding protein

    UniProtKB/TrEMBL
    D2HRT3, G1MFA2

  2. XM_034669512.1 → XP_034525403.1  TATA-box-binding protein

    UniProtKB/TrEMBL
    D2HRT3, G1MFA2

  3. XM_011232318.3 → XP_011230620.1  TATA-box-binding protein

    See identical proteins and their annotated locations for XP_011230620.1

    UniProtKB/TrEMBL
    D2HRT3, G1MFA2
    Conserved Domains (1) summary
    PLN00062
    Location:147 → 323
    PLN00062; TATA-box-binding protein; Provisional

  4. XM_011232317.3 → XP_011230619.1  TATA-box-binding protein

    See identical proteins and their annotated locations for XP_011230619.1

    UniProtKB/TrEMBL
    D2HRT3, G1MFA2
    Related
    ENSAMEP00000018031.1, ENSAMET00000018762.2
    Conserved Domains (1) summary
    PLN00062
    Location:147 → 323
    PLN00062; TATA-box-binding protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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