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STAM signal transducing adaptor molecule [ Pongo abelii (Sumatran orangutan) ]

Gene ID: 100446981, updated on 26-Mar-2024

Summary

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Gene symbol
STAM
Gene description
signal transducing adaptor molecule
Locus tag
CR201_G0018383
See related
Ensembl:ENSPPYG00000002126
Gene type
protein coding
RefSeq status
MODEL
Organism
Pongo abelii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pongo
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPonAbe1-v2.0_pri (GCF_028885655.2) 8 NC_071993.2 (17757526..17829572)
RS_2023_04 previous assembly NHGRI_mPonAbe1-v1.1-hic.freeze_pri (GCF_028885655.1) 10 NC_071995.1 (17756611..17834324)

Chromosome 8 - NC_071993.2Genomic Context describing neighboring genes Neighboring gene pre-mRNA-splicing factor 38A-like Neighboring gene 3-hydroxyacyl-CoA dehydratase 1 Neighboring gene uncharacterized LOC134762032 Neighboring gene transmembrane protein 236 Neighboring gene mannose receptor C-type 1 Neighboring gene U4 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of ESCRT-0 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal transducing adapter molecule 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028885655.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

Genomic

  1. NC_071993.2 Reference NHGRI_mPonAbe1-v2.0_pri Primary Assembly

    Range
    17757526..17829572
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054522009.2 → XP_054377984.1  signal transducing adapter molecule 1 isoform X1

  2. XM_002820566.5 → XP_002820612.1  signal transducing adapter molecule 1 isoform X2

    UniProtKB/TrEMBL
    A0A2J8VKU8, A0A6D2XZ09, H2N9W0
    Related
    ENSPPYP00000002467.2
    Conserved Domains (3) summary
    cd11964
    Location:213 → 267
    SH3_STAM1; Src homology 3 domain of Signal Transducing Adaptor Molecule 1
    cd03568
    Location:9 → 142
    VHS_STAM; VHS domain family, STAM subfamily; members include STAM (Signal Transducing Adaptor Molecule), EAST (EGFR-associated protein with SH3 and TAM domains) and Hbp (Hrs-binding protein). Collectively, they are referred to as STAM. All STAMs have at their ...
    cl25887
    Location:355 → 505
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]

  3. XM_054522010.2 → XP_054377985.1  signal transducing adapter molecule 1 isoform X3

  4. XM_054522011.2 → XP_054377986.1  signal transducing adapter molecule 1 isoform X4

  5. XM_054522012.2 → XP_054377987.1  signal transducing adapter molecule 1 isoform X5

Nucleotide Protein
Heading Accession and Version

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